Pairwise Alignments

Query, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

Subject, 391 a.a., 3-ketoacyl-CoA thiolase from Pseudomonas simiae WCS417

 Score =  287 bits (734), Expect = 4e-82
 Identities = 173/399 (43%), Positives = 232/399 (58%), Gaps = 18/399 (4%)

Query: 5   QDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIPE 64
           +D  IV   RTP+G+S  G  RN R +D+ A  +   L     +DP  +ED+I GC    
Sbjct: 6   RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNTKVDPNEVEDVIWGCVNQT 65

Query: 65  SQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVESM 124
            +QG N+AR+ +++  +P +  G TV+R C S +SA+  AA  I  G  DV +  GVE M
Sbjct: 66  LEQGWNIARMASLMTQIPHTAAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 125

Query: 125 SMVPMM-GNSPSLSPSIFEREGDVGIAYGMGLTAEKVAQQWKVSREAQDEFALASHQKAL 183
             V MM G  P+   S++  +   G+   MGLTAE + +   ++REAQD F L SHQ A 
Sbjct: 126 GHVSMMHGVDPNPHMSLYAAKAS-GM---MGLTAEMLGKMHGITREAQDAFGLRSHQLAH 181

Query: 184 AAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDTSLEGLAKLRTVFAA 243
            A   GKF DEI P+   D    L         +  + DE  RPDT+LE LA L+  F  
Sbjct: 182 KATLEGKFKDEIIPMNGYDENGFL---------KLCDYDETIRPDTTLESLAALKPAFNP 232

Query: 244 R-GTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPPHIMGIGPIEAI 302
           + GTVTAG SSQ +DGA  +I+ S +  +  G+ PLA   S A  GV P IMG GP+ A 
Sbjct: 233 KGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPAT 292

Query: 303 PAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLG-LDP--SKVNPMGGAIALGHPLGAT 359
             AL+ AGL   DID+FELNEAFAAQ+L V+  L  LD    KVN  GGAIALGHP G +
Sbjct: 293 QKALKRAGLTINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCS 352

Query: 360 GAIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFERV 398
           GA  S T+++ +++     G+ TMC+G+GQG + +FERV
Sbjct: 353 GARISGTLLNVMKQNGGNLGVATMCIGLGQGISTVFERV 391