Pairwise Alignments

Query, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

Subject, 400 a.a., beta-ketoadipyl CoA thiolase from Pseudomonas simiae WCS417

 Score =  299 bits (766), Expect = 8e-86
 Identities = 181/411 (44%), Positives = 237/411 (57%), Gaps = 27/411 (6%)

Query: 4   VQDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIP 63
           ++D +I  A RTPIG+   G     R DDL A  ++A +   PS+D  A++++  GCA  
Sbjct: 1   MRDVFICDAIRTPIGRFGGG-LSTVRADDLAALPIKALIERNPSVDWTAVDEVFLGCANQ 59

Query: 64  ESQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVES 123
             +   NVAR+  +LAGLP S+ G+T+NR CASG+ A+  A   I  GE ++ IA GVES
Sbjct: 60  AGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVES 119

Query: 124 MSMVPMMGNSPSLSPSIFEREGDVGIAY--------------GMGLTAEKVAQQWKVSRE 169
           MS  P +      + S   +  D  I +               M  TA+ VA  + VSR 
Sbjct: 120 MSRAPFVMGKADAAFSRTMKLEDTTIGWRFINPLMKAQYGVDAMPQTADNVADDYHVSRA 179

Query: 170 AQDEFALASHQKALAAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDT 229
            QD FAL S Q+  AAQ AG FA+EI P+ V  +      GE++     V  DE  R DT
Sbjct: 180 DQDAFALRSQQRTAAAQAAGFFAEEIVPVRVAHKK-----GETV-----VEQDEHPRADT 229

Query: 230 SLEGLAKLRTVFAARGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGV 289
           +LE L KL+ V     TVTAGN+S  +DGA ALILAS +AVK++GLT  AR +  AS GV
Sbjct: 230 TLEALTKLKPVNGPDKTVTAGNASGVNDGAAALILASAEAVKKHGLTARARVLGMASAGV 289

Query: 290 PPHIMGIGPIEAIPAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGL--DPSKVNPMG 347
            P +MGIGP+ A+   +   GL   D D  ELNEAFA+Q LAV+  LG+  D  +VNP G
Sbjct: 290 APRVMGIGPVPAVRKLVERLGLAVTDFDVIELNEAFASQGLAVLRELGIADDAPQVNPNG 349

Query: 348 GAIALGHPLGATGAIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFERV 398
           GAIALGHPLG +GA    T +H L +     G+ TMCVG+GQG A   ER+
Sbjct: 350 GAIALGHPLGMSGARLVLTALHQLEKTGGSKGLATMCVGVGQGLALAIERI 400