Pairwise Alignments

Query, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

Subject, 406 a.a., 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase from Pseudomonas putida KT2440

 Score =  306 bits (785), Expect = 5e-88
 Identities = 190/409 (46%), Positives = 238/409 (58%), Gaps = 26/409 (6%)

Query: 6   DAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIPES 65
           DA I+ A RTPIG+ + G   + R DDL A  L+A +   P LD KAI+D+I GCA    
Sbjct: 8   DALIIDAVRTPIGR-YAGALSSVRADDLAAIPLKALIQRHPELDWKAIDDVIFGCANQAG 66

Query: 66  QQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVESMS 125
           +   NVA + ++LAGLP  V G T+NR C SGL A+  AA  +R GEA +M+A GVESMS
Sbjct: 67  EDNRNVAHMASLLAGLPLEVPGTTINRLCGSGLDAIGNAARALRCGEAGLMLAGGVESMS 126

Query: 126 MVP-MMGNSPSLSPSIFER-EGDVG---------IAYG---MGLTAEKVAQQWKVSREAQ 171
             P +MG S        E  +  +G          AYG   M  TAE VA+Q+ +SR  Q
Sbjct: 127 RAPFVMGKSEQAFGRAAELFDTTIGWRFVNPLMKAAYGIDSMPETAENVAEQFGISRADQ 186

Query: 172 DEFALASHQKALAAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDTSL 231
           D FAL S  KA AAQ  G+ A EI P+E+  R             + V  DE  R DT+L
Sbjct: 187 DAFALRSQHKAAAAQARGRLAREIVPVEIPQRK---------GPAKVVEHDEHPRGDTTL 237

Query: 232 EGLAKLRTVFAARGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPP 291
           E LA+L T F   G+VTAGN+S  +DGA AL+LAS  A +++GL    R V  A  GV P
Sbjct: 238 EQLARLGTPFREGGSVTAGNASGVNDGACALLLASSAAARRHGLKARGRIVGMAVAGVEP 297

Query: 292 HIMGIGPIEAIPAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGL--DPSKVNPMGGA 349
            +MGIGP+ A    L   GL   D+D  ELNEAFAAQ LAV+  LGL  D  +VN  GGA
Sbjct: 298 RLMGIGPVPATRKVLALTGLALADLDVIELNEAFAAQGLAVLRELGLADDDPRVNRNGGA 357

Query: 350 IALGHPLGATGAIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFERV 398
           IALGHPLG +GA    T +H L     +Y + TMC+G+GQG A I ER+
Sbjct: 358 IALGHPLGMSGARLVTTALHELEETAGRYALCTMCIGVGQGIAMIIERL 406