Pairwise Alignments

Query, 391 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 420 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 87.8 bits (216), Expect = 5e-22
 Identities = 103/374 (27%), Positives = 171/374 (45%), Gaps = 39/374 (10%)

Query: 3   RRTLGLLAGALVAAPALVFARV--------RPLRIGVIGSWSGPYA---GGGRQFDAGMA 51
           RR   L   A+VAA AL+ A          R ++IGV+   S  YA   G G    + +A
Sbjct: 13  RRPPSLARRAVVAAGALMLAMPGIALAQDQRTIKIGVLTDMSSLYADVTGKG----SVVA 68

Query: 52  VWLAAHNHHIAGRP--VELLRRDVPGSAPDQARRHAQDLVESEKVDLLSGLDFSSNAYAV 109
             +A  + + AG+P  VE++  D    A D A   A+   ++E VD++  +  S+ A AV
Sbjct: 69  TQMAVEDFNAAGKPLKVEVIAADHQNKA-DVAAGIARKWFDTEGVDMVVDVPNSAVALAV 127

Query: 110 GAVAAQARMPLIVMNAASSGITARC--PFAVRVSFTIAQVTLPLARWALQQGLRDVCTVV 167
            A+A +    +I    +SS +T +   P  V  ++    +    A   ++ G ++  T+ 
Sbjct: 128 AAIAREKNKVMIASGPSSSDLTGKACSPNTVHWTYDTYALATGAATAVVESGGKNWFTLT 187

Query: 168 ADYASGVDAESAFVSGITAGGGRVGAMLRVPLATLDYSAYMLRLRELKPQAVFFFLPSGQ 227
           ADYA G   E    + +   GG+V   +R PL T D+S+++L+ +    Q V   + +G 
Sbjct: 188 ADYAFGHAMEQDVRNVVARTGGKVIGGVRAPLNTQDFSSFLLQAQASGAQVV-GLINAGG 246

Query: 228 MPAGFLKFWRDRGMADTGIRLLSTGDATDDNYLQGIGELADGL-VTSHHYSFAHESTA-- 284
                +K   + G+  +G RL++T     D +  G+ ++A GL  T   Y   +E T   
Sbjct: 247 DTINSIKQAVEFGIPQSGQRLVATVLYVTDVHSLGL-KVAQGLQFTESFYWDLNEGTRAW 305

Query: 285 NRRFTGVFETEYGSHLRPGYFAVAAH--DALAAIDAAMSSPAARGNAGGERLVDAFRGLK 342
            +RF    +  Y S L  G +A   H   A++A+ AA           G  +VD  + L 
Sbjct: 306 TKRFAPRNDGRYPSALHAGAYASTLHYLKAVSAVGAA---------TDGVAVVDKMKALP 356

Query: 343 LDSP---RGPLEID 353
            D P   +G + +D
Sbjct: 357 TDDPLFGKGSIRVD 370