Pairwise Alignments

Query, 391 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 404 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 29/278 (10%)

Query: 1   VRRRTLGLLAGALVAAPALVFARVRPLRIGVIGSWSGPY---AGGGRQFDAGMAVWLAAH 57
           ++R  LG  A AL    A        ++IGV+   SG Y   AG G    A MA+     
Sbjct: 3   MKRLLLGAAALALSTGMAHAQYSDGKVKIGVLTDLSGTYSDLAGKGTIVAAQMAI--DDF 60

Query: 58  NHHIAGRPVELLRRDVPGSAPDQARRHAQDLVESEKVDLLSGLDFSSNAYAVGAVAAQAR 117
              + G+P+EL+  D    A D A   A+   ++E+VD ++ L  ++ A AV  V+ +  
Sbjct: 61  GGKLNGQPIELISADHQNKA-DIASGIARKWYDTEQVDAIAELVTTAAAIAVREVSKEKG 119

Query: 118 MPLIVMNAASSGITARCPFAVRVSFTIAQVTLPLARW--ALQQGLRDVCTVVADYASGVD 175
              +V  AAS+ +T     A    +T     L        ++ G +    + ADYA G +
Sbjct: 120 KIDLVSGAASTPLTNDKCSATGFHWTYDTYALANGTGDAVVKNGGKTWFFLTADYAFGHN 179

Query: 176 AESAFVSGITAGGGRVGAMLRVPLATLDYSAYMLR------------------LRELKPQ 217
            ++     + A GG V   ++ P    D+S+++L+                  +  +K  
Sbjct: 180 LQAQTEKVVKANGGTVKGSVKHPFPNSDFSSFLLQAQSSGAQIIGLANAGADTINAIKQA 239

Query: 218 AVFFFLPSGQMPAGFLKFWRD---RGMADTGIRLLSTG 252
             F    +GQ  AG L F  D    G+ +    +L+TG
Sbjct: 240 KEFGITQAGQSLAGLLVFITDVHSLGLENAQGMMLTTG 277