Pairwise Alignments

Query, 512 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  219 bits (558), Expect = 2e-61
 Identities = 156/520 (30%), Positives = 251/520 (48%), Gaps = 48/520 (9%)

Query: 28  TDSGLFYSWRDVERASAMIANLLEA-LGLEKGARIAVQVEKSVEAMLLYLATLRAGYVFL 86
           ++ G+  ++ ++ER SA  A  L+    L+ G RIAVQ+   +   +     LRAG + +
Sbjct: 44  SNMGITLTYAELERQSAAFAGYLQQHTDLKPGDRIAVQMPNVLHYPIAVFGALRAGLIVV 103

Query: 87  PLNTAYQSAEIEYFIGNAEPAVVVCTSRNASWVAPIATAAGTKHVF---------TLDDD 137
             N  Y   E+ +   +A    +V  +   S V  + +     ++          T    
Sbjct: 104 NTNPLYTPREMRHQFKDAGVRALVYLNLFGSRVQEVCSDTEIDYLIEARMGDFMPTAKGW 163

Query: 138 RTGTLLEVAAQCSDRHTPARRKA--------------------DDMAAILYTSGTTGRSK 177
              TL++   +    ++  R  A                    DD+A + YT GTTG +K
Sbjct: 164 LVNTLVDKVKKMVPAYSLPRAVAFKRALHMGAGLGVTRHPVTLDDIAVLQYTGGTTGLAK 223

Query: 178 GAMLSHGNLLSNAEVLKDYWGWTEGD----------VLIHALPIFHVHGLFVALHGALLN 227
           GAML+HGNL++N + ++     T  D          V+I  LP++H++         +++
Sbjct: 224 GAMLTHGNLVANMQQVRACMSQTGDDGHPLIKEGQEVMIAPLPLYHIYAFTANCMCMMVS 283

Query: 228 GS-KMLWFSKFDPKRIVQKLPE--ATVFMGVPTLYVRLLAEPGLTREAVRNMRLFIAGSA 284
           G+  +L  +  D    +++L +   T  +G+ TL+V L+  P        +++L  +G  
Sbjct: 284 GNHNVLITNPRDIGGFIKELKKWRFTGLLGLNTLFVALMDHPDFKSLDFSHLKLTNSGGT 343

Query: 285 PLLIETFEEWRERTGHTILERYGMSETAMLTSNPYNPAQGERRGGTVGFALPGVQLRVRD 344
            L+  T E W++ TG  I E YG++ET+ + S   NP   + R GTVG  +P   ++V D
Sbjct: 344 ALIKATAERWQQITGCAIGEGYGLTETSPVAST--NPYGNKSRLGTVGIPVPATAMKVID 401

Query: 345 DSGRDCTTDEIGNIEVSGPNVFSGYWRMPEKTKEEFTADGFFKTGDVGKIDGLGYITIVG 404
           D G +    E G + + GP V  GYW+ PE T E   A+G+ KTGD+  ID  G+++IV 
Sbjct: 402 DHGVELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWLKTGDIAVIDEEGFVSIVD 461

Query: 405 RSKDLIISGGYNVYPAEIEGYINEMAGVAESAVVGVPHPDFGEVGVAIVIPKA-GASLDA 463
           R KDLII  G+NVYP EIE  +     VA  AV+GVP    GE     V+ +A G SL  
Sbjct: 462 RKKDLIIVSGFNVYPNEIEDVVMAHPAVANCAVIGVPDERTGEAVKLFVVARAEGVSL-- 519

Query: 464 DAIVADLKSKLANFKIPKRCFVVPELPRNTMGKVQKALLR 503
           + + A  K+    +K+PK   +   LP   +GK+ +  LR
Sbjct: 520 EELKAYCKTNFTGYKVPKHIVLRDSLPMTPVGKILRRELR 559