Pairwise Alignments

Query, 512 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 544 a.a., AMP-binding protein from Pseudomonas simiae WCS417

 Score =  214 bits (544), Expect = 8e-60
 Identities = 150/488 (30%), Positives = 237/488 (48%), Gaps = 20/488 (4%)

Query: 34  YSWRDVERASAMIANLLEALGLEKGARIAVQVEKSVEAMLLYLATLRAGYVFLPLNTAYQ 93
           Y+WR +     + A    ALG++ G R+ +      E  +  +A+ + G + + +N AY+
Sbjct: 48  YTWRQLAETVDLHARAFLALGMQTGDRLGIWAPNCAEWCISQIASAKLGVILVNINPAYR 107

Query: 94  SAEIEYFIGNAEPAVVVCTS--RNASWVAPI-ATAAGTKHVFTLDDDRTGTLL---EVAA 147
           S+E+EY +  +    +VC    + + + A + A     + + +LD       L   ++AA
Sbjct: 108 SSELEYVLKQSGCQWLVCAGSFKTSDYHAMLQALNPDLRGMISLDPSPPPGFLPWAQLAA 167

Query: 148 --------QCSDRHTPARRKADDMAAILYTSGTTGRSKGAMLSHGNLLSNAEVLKDYWGW 199
                   Q   R T      D    I YTSGTTG  KGA LSH N+L+N  ++ +  G 
Sbjct: 168 LGTGIPLEQLHSRQTSLH--FDQAVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGL 225

Query: 200 TEGDVLIHALPIFHVHGLFVALHGALLNGSKMLWFSK-FDPKRIVQKLPE--ATVFMGVP 256
           T  D L+  +P++H  G+ +   G + +G+ M++ +  FDP   +  + E  AT   GVP
Sbjct: 226 TAQDRLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLTAVAEEHATGLYGVP 285

Query: 257 TLYVRLLAEPGLTREAVRNMRLFIAGSAPLLIETFEEW-RERTGHTILERYGMSETAMLT 315
           T+++ +L  P L    + ++R  I   A   IE       E     +   YGM+ET+ ++
Sbjct: 286 TMFIAMLDHPQLGGFDLSSLRTGIMAGATCPIEVMRRVISEMHMSEVQIAYGMTETSPVS 345

Query: 316 SNPYNPAQGERRGGTVGFALPGVQLRVRDDSGRDCTTDEIGNIEVSGPNVFSGYWRMPEK 375
                    ERR  TVG   P ++ ++ D  G      EIG +   G +V  GYW  P+ 
Sbjct: 346 LQTGADDDLERRVTTVGRTQPQLENKIIDADGNTVARGEIGELCTRGYSVMLGYWNNPDA 405

Query: 376 TKEEFTADGFFKTGDVGKIDGLGYITIVGRSKDLIISGGYNVYPAEIEGYINEMAGVAES 435
           T+E     G+  TGD+  +D  GY+ I GR+KD+II GG NVYP E+E +      VA+ 
Sbjct: 406 TREAIDDAGWMHTGDLASMDAHGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADV 465

Query: 436 AVVGVPHPDFGEVGVAIVIPKAGASLDADAIVADLKSKLANFKIPKRCFVVPELPRNTMG 495
            V+G+P   +GE  VA V    G   +   +    K ++A+FK PK    V E P    G
Sbjct: 466 QVIGIPDERYGEAIVAWVKFHPGHVANELELQTWCKGRIAHFKTPKHFKFVEEFPMTVTG 525

Query: 496 KVQKALLR 503
           K+QK  +R
Sbjct: 526 KIQKFRMR 533