Pairwise Alignments

Query, 298 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  236 bits (601), Expect = 6e-67
 Identities = 131/294 (44%), Positives = 176/294 (59%), Gaps = 6/294 (2%)

Query: 3   KQLLALAVTAFV-ATGAFAQA-TDTLAKIKERGAVNLGVRDSS-GLAYTLGGGKYVGFHT 59
           +QLL  A+ A V A+ A A+  T TL KIKE G + LG RDSS   +Y  G  + VG+  
Sbjct: 6   RQLLGAAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSH 65

Query: 60  EMAERIIDDLSKDVGKPLKIDYQVITSQNRVPLVQNGTIDFECGSTTNNTARQKDVDFAY 119
           ++   ++D L K +G  +K+ Y ++TSQ R+PLVQNGT+D ECGSTTNN  RQ+ V F+ 
Sbjct: 66  DIQLAVVDALKKQLGTDIKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSV 125

Query: 120 TTYVEEVRILTKANSG---INGIADLKGKVVATTTGTTSVQTLRKNKRAEGLDFKEVMGK 176
             +    R+LTK   G        DL GK V TT GTTS + L+     + +    +  K
Sbjct: 126 GIFEVGTRLLTKVKDGQPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAK 185

Query: 177 DHADSFLLLESGRADAFVMDGSILAANAAKSKNPKDFKMVGEVLSVEPIACMLPKGDAKL 236
           DH ++F +LESGRA AF+MD ++LA   AK++ P D+ + G   S E   CM+ K DA  
Sbjct: 186 DHGEAFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAF 245

Query: 237 KKAIDDSIVRQIKDGSLAKLYDKWFTQPIPPNNVNLNMPVSEGTKAAWANPNDK 290
           KKA+DD+IV   K G + K Y+KWF QPIPP  +NLN  +SE  K   A P DK
Sbjct: 246 KKAVDDAIVAYFKSGEVNKSYEKWFMQPIPPKGLNLNFQMSEELKKLIAEPTDK 299