Pairwise Alignments

Query, 252 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 220 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  102 bits (253), Expect = 9e-27
 Identities = 53/201 (26%), Positives = 112/201 (55%), Gaps = 6/201 (2%)

Query: 43  VSVALTALLVALVVGSIIGTLRT---LPDSPWLVRFGNAWVELFRNVPLLVQVFIWYFVL 99
           + + L   L+++ +G +IG +     L     L  F + +V + RN P+LV + + YF L
Sbjct: 21  LGLGLELALLSIAIGCVIGLMMAFAMLSKHRALRVFASVYVTVVRNTPILVLILLIYFAL 80

Query: 100 PKMIPAMRDLPPFVLVVCALGFFTSARIAEQLRSGIQALPRGQRYAGMAVGFTTPQYYRF 159
           P +   +  +P F++    L  +  A + E  R+G+  +P+G R AG+A+G    +   +
Sbjct: 81  PNLGIRLDKIPSFIIT---LSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWRIRAY 137

Query: 160 VLLPMAYRIIMPPLTSESMNIFKNSSVAFAVSIPELTQFYLQAGEETSAQIPIYIGVVIL 219
           + +P+  R ++P L++  +++FK++S+A A+++PELT +  +   E+   I  ++    L
Sbjct: 138 ITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTAL 197

Query: 220 YVISAMLINRIMTFIERKVRV 240
           YV +  LI  ++ ++E+++ +
Sbjct: 198 YVAACYLIAMLLRYLEQRLAI 218