Pairwise Alignments

Query, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 5e-36
 Identities = 76/223 (34%), Positives = 128/223 (57%), Gaps = 12/223 (5%)

Query: 2   MNLDFS--FYNWSLVSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAA 59
           M+LDFS    +W     Y+L G   +++L+V+  +G +  GT L L R+ G  WL  P  
Sbjct: 1   MDLDFSPLLDSWQ----YLLGGLGVTLLLSVLTAIGALVLGTALGLGRVYGAAWLRIPIV 56

Query: 60  AYVNGMRSVPLVMVILGFFLLVPFVIG---HPIGAETSAVITFICFEAAYFSEIMRAGIQ 116
            Y++  R++P++++++ F+  VP + G   HP  A   A+   I   AAY +EI+RAGI+
Sbjct: 57  FYIDTQRAIPVLVILVWFYFAVPILTGISFHPFWAALMALTLHI---AAYVAEIVRAGIE 113

Query: 117 SIPRGQVFAGQAVGMTYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDML 176
           SI  GQ+ A  A+GM+ +Q ++ V+LPQA   MLP   +   I  +DT++   I   +++
Sbjct: 114 SIRPGQIRAALALGMSRAQIVRKVVLPQALVRMLPAFGSVLSITIKDTAIATVIAVPELM 173

Query: 177 KGFETAGKNFGRPEEAYLLAAVVYFVLCYALSWLVKRLHKKIA 219
           K  ET      RP E + +  V+YF++ +  + L+  L+K++A
Sbjct: 174 KRAETIAGQSYRPIEVFTVVMVIYFIILFPGTRLIDALYKRVA 216