Pairwise Alignments

Query, 222 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 311 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Azospirillum sp. SherDot2

 Score =  134 bits (336), Expect = 3e-36
 Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 9/212 (4%)

Query: 14  VSTYVLKGFYFSVILTVVATLGGIFFGTLLALMRLSGKKWLDFPAAAYVNGMRSVPLVMV 73
           V T    G   S++L VV  +G      LLAL R S    +   A  ++   R VPL+ V
Sbjct: 100 VPTERWSGLPVSLLLAVVGLVGAFPLAVLLALARRSSMGGVRTLAVLFIEVTRGVPLIAV 159

Query: 74  ILGFFLLVPFVI--GHPIGAETSAVITFICFEAAYFSEIMRAGIQSIPRGQVFAGQAVGM 131
           +    LL+P ++  G  I     A I  + F +AY +EI+RAG+QSIP GQ  A QA+G+
Sbjct: 160 LYVATLLLPLMLPAGAAIDKLLRAQIAIVLFVSAYLAEIVRAGLQSIPAGQYEAAQALGI 219

Query: 132 TYSQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKN---FGR 188
            Y Q+M+LVILPQA R ++P ++T  I LFQDT+L+  IG +D+L    TA K+    G 
Sbjct: 220 GYWQSMRLVILPQALRTVIPSIVTLAIGLFQDTTLIIVIGLFDLLNTARTAAKDPAWLGF 279

Query: 189 PEEAYLLAAVVYFVLCYALS----WLVKRLHK 216
            +EA+  AA++Y  +C   S    WL +RL +
Sbjct: 280 YDEAFGFAALIYLTVCVIASRYSLWLERRLRR 311