Pairwise Alignments

Query, 321 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 4e-28
 Identities = 93/319 (29%), Positives = 143/319 (44%), Gaps = 21/319 (6%)

Query: 1   MHDFTILVLPGAFNSSVAVTLDILGAAQALAPRAGVAPPRWRLCSVQGGPVPLQAGMTID 60
           MH   ++V P   + S+++   +   A  L    G     + L S  GG V    G +++
Sbjct: 1   MHSVALMVYPNFQSLSLSLG-SVFECANLLR---GEPAYEFHLVSESGGAVMTSQGFSVN 56

Query: 61  TARLPIRPRDDRSTWVVPGLGLNTPGDIRRCLESDDAAKAVAGLVRHAKAGGQ-VAASCS 119
           T   PIRP +   T +V G            LE       +  LV+ A A  + VA+ C 
Sbjct: 57  TT--PIRP-EGYDTLIVSGY-----------LEFRLPEANLLELVKAASAQSRRVASLCM 102

Query: 120 AVFLLNAAGLLQDRRATTSWWYAPLLARMAPGCTVDADRMVCADGPVVTAGAAFAQTDLM 179
            +F+L  AGLL+ +R TT W +AP   +  P   ++ D++   DG V T     A  DL 
Sbjct: 103 GIFVLAEAGLLEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLA 162

Query: 180 LHLLRERCGSALTDLVSRMLLIDGRQAQAPFVVPELLA--NGNDLVAKLAARVESALPDA 237
           L ++    GS L   ++R L+I  R+      +  LL     +D V    A     L   
Sbjct: 163 LAMVENDLGSDLARRIARKLVIAQRRGSEQSQLSALLELDPKSDRVQLALAYARENLTHD 222

Query: 238 PAVSVLAREFCMSERTLSRHIHKATGKSTQALVQSVRLRRARALLETSRMTVEQVAGAVG 297
            +V  LA    +S R  SR   + TG++    ++S+R+  ARA++ETSR  VE VA   G
Sbjct: 223 LSVEALADVARLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETG 282

Query: 298 YQDATALRRLMKKVAGANP 316
           + D   +R+   +  G  P
Sbjct: 283 FGDRERMRQAFLRAFGQPP 301