Pairwise Alignments

Query, 321 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  121 bits (303), Expect = 3e-32
 Identities = 98/320 (30%), Positives = 146/320 (45%), Gaps = 13/320 (4%)

Query: 3   DFTILVLPGAFNSSVAVTLDILGAAQALAPRAGVAPPRWRLCSVQGGPVPLQAGMTIDTA 62
           D  +L+ PG   ++V    D+   A  +A   G         +V+   + +      +T 
Sbjct: 12  DIGLLLYPGVQRAAVHGLADLFLVANRVAAELG---------AVELPHIRVSCWQADETG 62

Query: 63  RLPIRPRDDRSTWVVPGLG-LNTPGDIRRCLESDDAAKAVAGLVRHAKAGGQVAASCSAV 121
           +L   P  D S   VPGL  L  P  +    +++   +  A L      G  +A+ C  V
Sbjct: 63  QL--LPASDNSAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASVCIGV 120

Query: 122 FLLNAAGLLQDRRATTSWWYAPLLARMAPGCTVDADRMVCADGPVVTAGAAFAQTDLMLH 181
           F + A+GLL  R A T W Y   LA+  P   V+A + +  DG +VT+    A TDL L 
Sbjct: 121 FFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLR 180

Query: 182 LLRERCGSALTDLVSRMLLIDGRQAQAP-FVVPELLANGNDLVAKLAARVESALPDAPAV 240
           LL    G+ +    +R L +D   A  P  V    L +G++ V K+   ++        +
Sbjct: 181 LLERFLGTTVAQETARYLAVDPVAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDADL 240

Query: 241 SVLAREFCMSERTLSRHIHKATGKSTQALVQSVRLRRARALLETSRMTVEQVAGAVGYQD 300
           + +A    +  RT  R    ATG       Q VR+ RA  LLE +R TVEQ+A  VGYQD
Sbjct: 241 ATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQD 300

Query: 301 ATALRRLMKKVAGANPSRYR 320
             A R++ ++V G  PS YR
Sbjct: 301 PGAFRKVFQRVIGLTPSDYR 320