Pairwise Alignments

Query, 650 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 6e-40
 Identities = 146/538 (27%), Positives = 240/538 (44%), Gaps = 48/538 (8%)

Query: 76  IRWSYAELLARLHQTANMLHTLGVGPQDAVAVLLPGCLEY-HLALWGGEAAGIVQPLNPL 134
           +R+S+ +L  ++   A  L  LGV   D V +  P C ++  L L   +   I+  +NP 
Sbjct: 44  LRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPA 103

Query: 135 LTDEKLVALMTAARAKVLIAYGSDSESGMWSKAMRLRGQ-------------VPTLTTVL 181
               +L  ++  +  + L+   +   S   +    L  +             +P L  V+
Sbjct: 104 YRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGELASECLPELRGVI 163

Query: 182 RVAPHDEAPGAAGQLP-EGVAEFDVLRAAQPDDRLVSGRDIA-----PSDIAAYFHTGGT 235
            +A    A   AG LP    AE    RA Q      + R  +     P +I    +T GT
Sbjct: 164 SLA----ANPPAGFLPWHAFAE----RAGQTSVEACTARQQSLQFDQPVNIQ---YTSGT 212

Query: 236 TGAPKLARHSHGAQVFTAWASVQVAGMNDQGISINGYPLFHVAGVLPASLSSLSAGVEVI 295
           TGAPK A  SH   +   +   +  G+  +   +   PL+H  G++ A+L  ++ G  +I
Sbjct: 213 TGAPKGATLSHYNILNNGFMVGESLGLTARDRMVIPVPLYHCFGMVMANLGCITHGSTMI 272

Query: 296 IPTTSLLRNKEVLANYWKLVARYRPTSLSAVPTVLAALANVPLDG-ADISSITYCRTGAA 354
            P  +      + A     VA  R T L  VPT+  A+ + P     D+S++       A
Sbjct: 273 YPNDAFDAELTLRA-----VAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGA 327

Query: 355 VLAPELAAR-FERLFGLHVHESLGMTEMAGISTITPP--GVNGPAGCVGFRLPYMQMRVV 411
               E+  R  +++    V  + GMTE + +S  T P   +      VG   P ++ ++V
Sbjct: 328 TCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGRTQPQLENKLV 387

Query: 412 ALDENGNASDREMPPGEQGMVLFKSPNVFSGFVD-PADNAKAFTADGWLATGDLGWIDSE 470
                 +A    +P GE G +  +  +V  G+ D P   A A    GW+ +GDL  +D +
Sbjct: 388 ------DADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQ 441

Query: 471 ERLNLTGRSKDLIIRSGHNIDPKTIEDALGAHPAVQLCAAVGAPDAYAGELPVIFATLVP 530
             + + GR+KD+IIR G NI P+ +E+    HPAV     +G P +  GE  V +  L P
Sbjct: 442 GYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHP 501

Query: 531 GASATEEELLAFTAARVDEAPARPKWVSVIETMPMTNVGKIYKPELRAMAAQRVVAAA 588
           G SAT EEL  +  AR+      P+++  ++  PMT  GK+ K  +R ++   + AA+
Sbjct: 502 GHSATVEELQGWCKARIAHFKV-PRYIRFVDEYPMTVTGKVQKFRMREISVAEIAAAS 558