Pairwise Alignments

Query, 402 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 386 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  117 bits (294), Expect = 4e-31
 Identities = 109/410 (26%), Positives = 193/410 (47%), Gaps = 39/410 (9%)

Query: 1   MDLNFTTEEEAFRSEVRAFLAAKLPVRLSEKVRSGKIL-EKADMQEWHAILNERGWLANH 59
           M+   T E+E     VR+F+A +L        R+  +  E A      AI    G+ A +
Sbjct: 1   MNFQLTQEQEMLVEAVRSFVAKELLPHEEAVDRADAVSPELAAQIRGKAIA--AGFYAFN 58

Query: 60  WPEQYGGPGWTAVEKFIFENECA-LAFAPRIVPFGVNMLGPVLIKYGNEAQKSHWLPRIL 118
            PE+ GG G   + + + E E + +++A  +    V     +L+   +E    + LP + 
Sbjct: 59  MPEEVGGGGLDYLSQALIERELSKVSWALHVF---VARPSKILMACKDEQINDYLLPCV- 114

Query: 119 NGADWWCQGYSEPGAGSDLAAVKTSAVRGIDAQGDHYIVNGQKTWTTLGQHAN--MIFCL 176
            G    C   +EPGAGSD  A+KT AVR    QGD +++NG K + +   HA+  ++F +
Sbjct: 115 QGEKVDCFALTEPGAGSDANAIKTRAVR----QGDDFVINGSKHFISHAGHADFAIVFAV 170

Query: 177 VRT-NREAKKQEGISFLLIDMNSPGVEVR--PIITLDGEHEVNEVFFSDVRVPAENLVGE 233
             T     +K+  ++ LL+D  +PG+ +R  P    +  +   E+FF D RVPA  ++GE
Sbjct: 171 TDTYEHNGRKRNAVTALLVDRGTPGMTIRRGPKCVSNRGYHTYELFFDDCRVPASKVLGE 230

Query: 234 ENKGWTCAKYLLTYERTNIAG--VGFSVAALEQLKGIAATQTKNGKPLAEDPAFAARMAR 291
             KGW  A   LT  R  +A   VG +  AL+     AA + + G+ +      + ++A 
Sbjct: 231 VGKGWEVANAWLTAGRVMVAANCVGQAQRALDLSLQWAADRKQFGQAIGSYQGVSFKLAD 290

Query: 292 VEIDLENMKTTNLRVIAAVAGGGVPGAESSMLKIRGTEIRQEISSLARRAMGVYGRPFVA 351
           +   +   +   L     +  G +   E+ M K+  +E+   +  +A  A+ ++G   + 
Sbjct: 291 MATQIRAAEMLTLHTAWKMDQGNMTDGEAGMAKLFASEV---LGKVADEAVQIFGGMGLM 347

Query: 352 EALKDGYTGETFGPDYASAAASRYFNNRKLS-IFGGSNEIQKNIISKMIL 400
           +           GP        R + N ++  I+ G++EIQ++II++ +L
Sbjct: 348 DE----------GP------VERIWRNARIERIWEGTSEIQRHIIARELL 381