Pairwise Alignments

Query, 402 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 3e-33
 Identities = 112/398 (28%), Positives = 184/398 (46%), Gaps = 38/398 (9%)

Query: 8   EEEAFRSEVRAFLAAKLPVRLSEKVRSGKILEKADMQEWHAILNERGWLANHWPEQYGGP 67
           E++     VRAF   +L     +  +  +  ++A  +     + E G      PEQ+GG 
Sbjct: 6   EQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDE-----MAELGLFGMLVPEQWGGS 60

Query: 68  GWTAVEKFIFENECALAFAPRIVPFGV-NMLGPV-LIKYGNEAQKSHWLPRILNGADWWC 125
               V   +   E A           V N +G V ++++GNE QK  +L  +  GA    
Sbjct: 61  DTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGA 120

Query: 126 QGYSEPGAGSDLAAVKTSAVRGIDAQGDHYIVNGQKTWTTLGQHANMIFCLVRTNREAKK 185
              +EP AGSD +++KT A      +GDHY++NG K + T GQ+A ++     T+ EA K
Sbjct: 121 FALTEPQAGSDASSLKTRA----RLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGK 176

Query: 186 QEGISFLLIDMNSPGVEVRPIITLDGEH--EVNEVFFSDVRVPAENLVGEENKGWTCAKY 243
           + GIS  ++  +SPG +V  +    G+H  +  ++ F +V+VP  N +G E +G+  A  
Sbjct: 177 R-GISAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALA 235

Query: 244 LLTYERTNIAG--VGFSVAALEQLKGIAATQTKNGKPLAEDPAFAARMARVEIDLENMKT 301
            L   R  IA   VG + AA E  +  A  +   GKPL E  A A R+A +   +   + 
Sbjct: 236 NLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQ 295

Query: 302 TNLRVIAAVAGGGVPGAESSMLKIRGTEIRQEISSLARRAMGVYG--RPFVAEALKDGYT 359
             L   A    G     E+SM K+  +E+ +++ S A + +G YG    F  E +     
Sbjct: 296 MVLHAAALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERI----- 350

Query: 360 GETFGPDYASAAASRYFNNRKLSIFGGSNEIQKNIISK 397
                          Y + R   I+ G+++IQ+ +I++
Sbjct: 351 ---------------YRDVRVCQIYEGTSDIQRMVIAR 373