Pairwise Alignments

Query, 507 a.a., Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) from Variovorax sp. SCN45

Subject, 285 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  140 bits (354), Expect = 4e-38
 Identities = 96/274 (35%), Positives = 133/274 (48%), Gaps = 32/274 (11%)

Query: 3   VRLDNPVDFDAFRREARRLLANGVPPDHVEWSDGAQGEGGAGLFADTPAGEGLPATEPAS 62
           + LD    F  +R +AR LL++G+ P  V WS G          AD  A   +PA  P  
Sbjct: 4   IALDCDDLFATWREQARGLLSHGIDPSEVTWSQGPM--------ADLLAVLAVPAAPPDG 55

Query: 63  AA--RQPVPASFLALCADVILHREPQRLALMYRLLWRLAHEPALRHDPLDADML--QARQ 118
               R  VPA+ L+       +R  QR  L+Y +LWR+AH    R   L  D L  + ++
Sbjct: 56  PGPFRAKVPAALLSQLEQASRYRGEQRWNLLYEVLWRVAHGD--RTAMLAGDRLGSELQR 113

Query: 119 MAKAVHRDIHKMRAFVRFTRVEGEQGERH----VAWFEPDHRIVEANAPFFARRFAQMRW 174
             K V R+ H + AFVRF  +  E  E      VA+ EP H I+ + +  FA R  ++RW
Sbjct: 114 RIKQVTREAHHLHAFVRFVPLPEELAEHLQLDLVAYHEPAHDILHSASAHFADRLGRLRW 173

Query: 175 AILTPERCVAWDGQALTFREGADRREKPPP---------DAGEQLWLVYYEHIFNPARLK 225
            I TP+  + +DGQ+  ++     R+ P P         D G +LW  YY H FNPARL 
Sbjct: 174 LIATPQDGIRFDGQSFDYQ-----RQCPEPWRQWARNAEDPGAELWRTYYRHTFNPARLN 228

Query: 226 LAMMRREMPARYWHNLPEAALIGPLAEAAQARSQ 259
              +R  MP R+W +LPE  LI  L   A+   Q
Sbjct: 229 PDALRLHMPGRFWRHLPEGMLIPQLEGLARQGKQ 262