Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 6/139 (4%)

Query: 179 ASALAVAHGVQSILVAGLQTLPAARAPALSNLTAYHLARVKRLIDEQLADPMLSVGTLAA 238
           ASAL      +  ++A +Q       P+        +AR + L++ QLADP  S+  LAA
Sbjct: 139 ASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPP-SLEALAA 197

Query: 239 QLGVSVSHIHRVFKSEP-LTPSQYIWERRLEACSRDLLEPRLAGRPVAEIAYGRGFNDAA 297
            + +S  H  RVF+    L P  ++ +RRL A +R++L+  LA    +++A+  GF D +
Sbjct: 198 AVNLSPFHFARVFRQATGLPPHAWLKQRRL-ARAREMLKHGLAA---SQVAFDLGFADQS 253

Query: 298 HFSRAFRERFGCSPRAWRQ 316
           H SR F++ +G +P A+RQ
Sbjct: 254 HLSRQFKQAYGVTPGAYRQ 272



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 253 SEPLTPSQYIWERRLEACSRDLLEPRLAGRPVAEIAYGRGFNDAAHFSRAFRERFGCSPR 312
           +EP  P     E    A +R+LLE +LA  P  E           HF+R FR+  G  P 
Sbjct: 163 AEPSAPGH---EPLAVARARELLESQLADPPSLEALAAAVNLSPFHFARVFRQATGLPPH 219

Query: 313 AWRQQR 318
           AW +QR
Sbjct: 220 AWLKQR 225