Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 321 a.a., Transcriptional regulator, AraC family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 77/315 (24%), Positives = 131/315 (41%), Gaps = 6/315 (1%)

Query: 6   STDAVSRDQRLAYWTDMICNVYVQLECDAVQQSGTGNFEGSIRQHTLPSLDMSVVTSGPQ 65
           STD+V    R   W +  C     L     Q++    F G+I +  L +LD++ +     
Sbjct: 6   STDSVPAATRFDEWREACCEHVYALTPQRQQEAQRQPFHGAIARRQLGALDVTDIVCDGH 65

Query: 66  KVMRTPGHIAHSSDDYFLVSIQARGQGVVRQDGRD-AVLSAGDFALYDSTRPYELLFEES 124
            V R    I     D + V +Q +G+    Q G+   V  AGD  + D   P+    +++
Sbjct: 66  LVQRREQDIEERPSDTYYVYLQRQGRAWFEQQGQPRCVAEAGDIVIADPNLPFRTGTDDA 125

Query: 125 -FEQIVLKLPGDRLRGELR--DTEALTATTVSGREGAGHLLLGMIRTLREDIDTLQPASA 181
            F+  + ++  +RL+  L     E L    +        L+   +  L      L P S 
Sbjct: 126 VFDFRLWRIARERLQPLLALCSGEPLPMRHIDRALAERELIASWLDGLLRHHAGLSPTSR 185

Query: 182 LAVAHGVQSILVAGLQTLPA-ARAPALSNLTAYHLARVKRLIDEQLADPMLSVGTLAAQL 240
             +A G    LVAG     A A  P         L RV++ ++++  +  L+   +A   
Sbjct: 186 -DMALGTLCALVAGAVGAGADAHEPTRLARRRALLLRVQQQVEQRATEMDLTPERVARAF 244

Query: 241 GVSVSHIHRVFKSEPLTPSQYIWERRLEACSRDLLEPRLAGRPVAEIAYGRGFNDAAHFS 300
           GVS+  +H++F     +  +Y+   RL      L +P       AEI +  GF + + F 
Sbjct: 245 GVSLRTLHQLFSLSDSSFHEYLTRARLARAHALLRDPASRHLGTAEIGFAAGFGEVSTFY 304

Query: 301 RAFRERFGCSPRAWR 315
           R FR+R+  +P  +R
Sbjct: 305 RRFRQRYDMAPGEFR 319