Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 301 a.a., transcriptional activator for tynA and feaB from Escherichia coli BL21

 Score =  109 bits (273), Expect = 7e-29
 Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 7/278 (2%)

Query: 40  TGNFEGSIRQHTLPSLDMSVVTSGPQKVMRTPGHIAHSSDDYFLVSIQARGQGVVRQDGR 99
           T  + G +  H    L +S VT+    + RT   +  S D +F    Q  GQ ++ QD R
Sbjct: 29  TERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDER 88

Query: 100 DAVLSAGDFALYDSTRPYELLFEESFEQIVLKLPGDRLRGELRDTEALTATTVSGREGAG 159
              + AGD  L D++RP  L ++ES +QI L LP   L       + + A  +       
Sbjct: 89  QVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPVCAERLDADLPMV 148

Query: 160 HLLLGMIRTLREDIDTLQPASALAVAHGVQSILVAGLQTLPAARAPALSNLTAYHLARVK 219
            L     R L+E ++   PA +   +      +V  L+ +   R  ++         +V 
Sbjct: 149 QL---SHRLLQESMNN--PALSETESEAALQAMVCLLRPVLHQRE-SVQPRRERQFQKVV 202

Query: 220 RLIDEQLADPMLSVGTLAAQLGVSVSHIHRVFKSEPLTPSQYIWERRLEACSRDLLEPRL 279
            LID+ + + +L    +AA+ G+SV  ++R+F  + L  +QYI  RRL+ C+ D +    
Sbjct: 203 TLIDDNIREEILRPEWIAAETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCA-DAIRHAA 261

Query: 280 AGRPVAEIAYGRGFNDAAHFSRAFRERFGCSPRAWRQQ 317
               +A I +  GF+D +HFS  F++RFG +P  +R++
Sbjct: 262 DDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRK 299