Pairwise Alignments

Query, 275 a.a., Uncharacterized UPF0721 integral membrane protein from Variovorax sp. SCN45

Subject, 260 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  204 bits (520), Expect = 1e-57
 Identities = 107/252 (42%), Positives = 159/252 (63%), Gaps = 1/252 (0%)

Query: 18  LGLGTGFLAGLLGIGGGMMMVPFITIIMGHRGVPADLAVKIAIATSMATIIFTSVSSVRA 77
           LG   G LAGL G+GGG+++VP +      +G  A +   +A+ TS+ATI+FTS+++VR 
Sbjct: 9   LGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINAVRE 68

Query: 78  HHKRGAVRWDIVKRLAPGIVIGSLAGSLGVFALLKGTALAIVFALFVGFSATQMFLDKKP 137
           HH++ AV+W I   +  GI++G+  G+    +L++G  L  +  +F    A QM LD KP
Sbjct: 69  HHRKRAVQWPIFIWMTIGILLGAGVGAKTA-SLIQGPLLQKIIGVFALVIAAQMALDLKP 127

Query: 138 KPTRQMPGTGGQLAAGGAIGFISGLVGAGGGFISVPFMTWCNVAIHNAVATSAALGFPIA 197
           K +R +PG  G + AGG IG+ S + G GGG ++VPF+TW ++ +  AVATS+A G PIA
Sbjct: 128 KASRGVPGKPGLIGAGGVIGWASAIFGIGGGSLTVPFLTWRSLPMQQAVATSSACGLPIA 187

Query: 198 VANVAGYVISGQSVEGLPAGSFGYIWLPALAVIAACSVLTAPLGARAAHSLPVKKLKRVF 257
           VA+   +++ G   E LP  S GY++LPAL  IA  S+  A  GAR AH L  + LKR+F
Sbjct: 188 VASALSFMLLGWHEEHLPPHSLGYVYLPALVGIAVTSMFFARFGARLAHKLSPRLLKRLF 247

Query: 258 ASILYVLAAYML 269
           A++L+ +    L
Sbjct: 248 AALLFCVGLSFL 259



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 8/50 (16%)

Query: 150 LAAGGAIGFISGLVGAGGGFISVPFMTW--------CNVAIHNAVATSAA 191
           L  G   G ++GL G GGG I VP + +         +V  H AV TS A
Sbjct: 7   LLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLA 56