Pairwise Alignments

Query, 710 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

Subject, 662 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 6e-58
 Identities = 195/690 (28%), Positives = 308/690 (44%), Gaps = 62/690 (8%)

Query: 10  SRAELLFSGKSFVAAMLAMYLASRAGLPRPFWALMTTYVVAHPLAGAVRSKAVYRFCGTL 69
           S   L F+ K+ +   LA++LA R GL +P WALMT ++VA PL+G V  K + R  GTL
Sbjct: 12  SSLALKFAIKTLLGGGLALWLAMRWGLEQPSWALMTAFIVAQPLSGMVVQKGLARLAGTL 71

Query: 70  IGSTATVLLVPALSNAPELLTLVLALWVGLCLCISLFDRTPRSYVFMLAGYTAALIGFPS 129
           +G+  +VL +   +  P L  L LALW+ LC   S   R+  +Y F+LAGYTAA+I  P+
Sbjct: 72  VGTVMSVLFIGLFAQTPGLFLLTLALWLALCTAASTQLRSAWAYAFVLAGYTAAIIALPA 131

Query: 130 VQTPLALFDTAVARVEEIGLGIFCATLIHSLVLPAGLAPTVLGLLDRTLLDARK-WLGDL 188
           +  PL +FD AVAR  EI LGIFCAT   +L+ P  +   + G        AR+ W   L
Sbjct: 132 IDHPLQVFDQAVARCTEICLGIFCATASSALLWPMRVEQQLGG-------QARQAWQNGL 184

Query: 189 LQPAAHGGGNGANGGEPKRLDDDRRRL---AGDITQLRLLSTHVPFDTTHLRWTAGAIRA 245
              +A  GG           D+ R+ L    G I  +     H  F+    R  A AIR 
Sbjct: 185 QAASAMLGGE----------DEARKGLLESLGRIVAIDSQREHAWFEGNRGRQRARAIRG 234

Query: 246 MQDRVAALTPALSAVEDRLQALAQAEGRLAPDVTAVLAQAAQWLREEAEPGADAATRAER 305
           +  ++  L     +V  + + L + E      +T  L +    L +  +P          
Sbjct: 235 LSQKLMVLLRISRSVRRQWRQLDEGE---VEHLTPWLQEVRTLLAQPDQPS--------- 282

Query: 306 LQTLRRAIDALSATPANAQPQHTAWGRALRIGLAGRLEELVDGWTACAQLRQDIDEGLKG 365
           L  LR+ I   +     +  +H             R+  L+D   A +Q  +D++    G
Sbjct: 283 LLLLRQRIWDAAHDEQISSAEHFC---------LARMALLLDYAMAASQALEDVE---AG 330

Query: 366 AAPLRRTAALGSRVLHRDYGMALLSALAAVIAICLCGAFWILTGWPMGSAATMMAAVFCC 425
            AP   +  L +   HRD+ +ALL    + +A  +   FW+ T WP      ++  V C 
Sbjct: 331 RAPKDVSQGLAA---HRDWSLALLFGSRSALAFLVMSGFWLATAWPSAPGGLVLTCVVCS 387

Query: 426 FFATMDDPVPAIHGFLKWTLWSIPISALYVLVLMPMVQDFGMLVL-ICAPLLL-LLGLYL 483
            FA+ ++       FL+    +IP + +   +++P    F ML L +  PL L  LG+  
Sbjct: 388 LFASRENGAQIGLSFLRGIFLAIPAAFVVGQIMLPQWSSFAMLCLGMGVPLFLGALGMAH 447

Query: 484 PRPTHFMAAMALIFGVCGTLALHDTASSDLVSFINSMIGQVVGVVVAARVTRLVRSVGAD 543
           PR      +  L F V   ++  +     + + +NS +  +VGV  A    RL+      
Sbjct: 448 PRTGATATSYCLHFIV--LVSPLNAMQFGVATMLNSALAMLVGVSAAVMAFRLLVFRHPA 505

Query: 544 WSARRIQRATWRELGDMAASSQPQYAQSDAYAVRMLDRIGLLAPRIAQAGGTVEGVAAND 603
           W  RR++ AT  +L  +  + +        +  RM DR+  LA R A      E    +D
Sbjct: 506 WLGRRLRAATQNDL--VRLTRRDLRGADSWFGGRMADRLMQLA-RHASELPEGERKRWDD 562

Query: 604 ALRDLRMGADIAVLQRVRGQLPTSTSAALLGGIARFFRQRGEGRMNPRPADLLPQIDEAL 663
            L  L +G ++  L     ++  + + A LG   R + Q  E  +   PA    Q+ +A 
Sbjct: 563 GLHGLDIGDELVHL-----RMCLAVAQAPLGRAEREYLQHVEAALAKGPAAGRGQLLDAA 617

Query: 664 NAVLGAPASAAPAAS--RSAVTALVGLRRN 691
           +    A     PA+   R A  A++ L+++
Sbjct: 618 SEQFIAALRRLPASDPLRLAEGAVLQLQKS 647