Pairwise Alignments

Query, 710 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

Subject, 655 a.a., p-hydroxybenzoic acid efflux pump subunit AaeB from Escherichia coli ECOR38

 Score =  139 bits (350), Expect = 4e-37
 Identities = 146/547 (26%), Positives = 235/547 (42%), Gaps = 61/547 (11%)

Query: 16  FSGKSFVAAMLAMYLASRAGLPRPFWALMTTYVVA---------HPLAGAVRSKAVYRFC 66
           F+ K   A +LA+++     L  P WA++T  +VA          P +GA+R +   R  
Sbjct: 13  FAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGFLRII 72

Query: 67  GTLIGSTATVLLVPALSNAPELLTLVLALWVGLCLCISLFDRTPRSYVFMLAGYTAALIG 126
           GT IG  A ++++ A+  AP L+ LV  +W G C  IS   R   SY + LAGYTA +I 
Sbjct: 73  GTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIV 132

Query: 127 FPSVQTPLALFDTAVARVEEIGLGIFCATLIHSLVLPAGLAPTVLGLLDRTLLDARKWLG 186
                 PL     AV R  EI +GI CA +   L  P  +   V   L+ +LL A+  L 
Sbjct: 133 ITIQPEPLLTPQFAVERCSEIVIGIVCAIMADLLFSPRSIKQEVDRELE-SLLVAQYQLM 191

Query: 187 DLLQPAAHGGGNGANGGEPKRLDDDRRRLAGDITQLRLLSTHVPFDTTHLRWTAGAIRAM 246
            L     HG G   +    K   D  RR     T L+ + +++  +++  RW     R  
Sbjct: 192 QLC--IKHGDGEVVD----KAWGDLVRR----TTALQGMRSNLNMESS--RWARANRRLK 239

Query: 247 QDRVAALTPALSAVEDRLQALAQAEGRLAPDVTAVLAQAAQWLREEAEPGADAATRA-ER 305
                +LT    + E  L  +      L  D            RE  +   + A    ++
Sbjct: 240 AINTLSLTLITQSCETYL--IQNTRPELITDT----------FREFFDTPVETAQDVHKQ 287

Query: 306 LQTLRRAI--DALSATPANAQPQHTAWGRALRIGLAGRLEELVDGWTACAQLRQDIDEGL 363
           L+ LRR I       TP        +W     +  A R + L  G  +  ++    +E L
Sbjct: 288 LKRLRRVIAWTGERETPVTIY----SW-----VAAATRYQLLKRGVISNTKINATEEEIL 338

Query: 364 KGAAPLRRTAALGSRVLHRDYGMALLSALAAVIAICLCGAFWILTGWPMGSAATMMAAVF 423
           +G   ++  +A        +   A+++     ++  L   FW+ TGW  GS A +M AV 
Sbjct: 339 QGEPEVKVESA--------ERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVV 390

Query: 424 CCFFATMDDPVPAIHGFLKWTLWSIPISALYVLVLMPMVQDFGMLVLICAPLLLL---LG 480
                 + +P      F+  TL ++P+  LY LV++P  Q    ++L+C  L +L   LG
Sbjct: 391 TSLAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQ--SMLLLCISLAVLGFFLG 448

Query: 481 LYLPRPTHFMAAMALIFGVCGTLALHDTASSDLVSFINSMIGQVVGVVVAARVTRLVRSV 540
           + + +    + +M  +      + L +  +     F++S +GQ+VG V+A  V  LVR  
Sbjct: 449 IEVQK--RRLGSMGALASTINIIVLDNPMTFHFNQFLDSALGQIVGCVLAFTVILLVRDK 506

Query: 541 GADWSAR 547
             D + R
Sbjct: 507 SRDRTGR 513