Pairwise Alignments

Query, 312 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

Subject, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 2e-29
 Identities = 104/345 (30%), Positives = 147/345 (42%), Gaps = 81/345 (23%)

Query: 18  RVLFTVLVVAAAVWAGLRLWDHYELAPW---------TRDGRVRANVVQIAPDVSGLVTA 68
           + LF   V+A AV AG+       + PW         T D  V A+   +AP V+G +  
Sbjct: 20  KTLFIGSVLAVAVLAGI-------VGPWMFGSDHRQSTNDAYVTADYTVVAPKVAGFIKQ 72

Query: 69  VPIRDNQPVAAGTLLFEVDRARYDLAVRQAQAALSAQRAMSAQ----------------- 111
           V + DNQ V AG LL  +D   Y  A+  AQA L   +A SA                  
Sbjct: 73  VLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSADARATLERQDALIAQAEA 132

Query: 112 -VQRENARNAGLDDLVSKESR------------EQTRSRVEQMQAAVAQAEVA------- 151
            V+   A  A  D  V++ SR            +Q RS V+Q +A +A A+ A       
Sbjct: 133 AVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQARARLANAQAARVAARKQ 192

Query: 152 ---------------------LDSAKLNLQRAEVRAPTSGLVTNLDLRQGSYAAAGRPVL 190
                                L+ A+L+L    + AP  G+V    LR G+Y   G  +L
Sbjct: 193 VDILTAQVASADGQLKRAEAGLEKAQLDLSYTRITAPVDGMVGERALRVGAYVNPGARLL 252

Query: 191 ALVDAQSFYVEGYFEETKLPRIHLGDRVRVT-PMGGGAVLEGAVDSVAAGIADHDRSTSA 249
           ++V  Q  YV G F+ET+L  +  G  VR++     G  L+G V S+A         T A
Sbjct: 253 SVVPLQQAYVVGNFQETQLTHVQPGQPVRISVDTFSGETLQGHVQSIAPATG----VTFA 308

Query: 250 NLLPSVNPTFNWVRLAQRIPVRIKLDP-LPQGARLVAGQTVTVQV 293
            + P  N T N+ ++ QRIPV+I LD   P   RL  G +V   +
Sbjct: 309 AVKPD-NATGNFTKVVQRIPVKIVLDDGQPLLTRLRVGMSVEATI 352