Pairwise Alignments

Query, 492 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

Subject, 472 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  180 bits (456), Expect = 1e-49
 Identities = 141/476 (29%), Positives = 221/476 (46%), Gaps = 15/476 (3%)

Query: 10  RLASLAAAAALAACA-AVGPDYRQP----PEALASQSAAGKPFAEAPANAAPLPPHWWRL 64
           RL  LAA   LA    ++ P Y+ P    P     Q++ G   +  P++   L P WW L
Sbjct: 4   RLKPLAALMLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSDQ--LAPEWWTL 61

Query: 65  YHDPLLDKLVEQALAHNTDLRQAVANLERERAIEDEVAGAKYPSIGVNGGPSYGHVSGLS 124
           Y+D  L+ L +Q L  N DL  A+A+ +  +A   ++    +P I  +  P     S   
Sbjct: 62  YNDSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQSDSR 121

Query: 125 LLQKGYEPPNTFNYSAGASLSYQVDLFGQIRRAIEASQASTQAAEAALDLVRVNVAAGTA 184
            L+   +P    + +AG SLSY +DL+G+IR  + A  A  QA+   L + R+++    A
Sbjct: 122 PLRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQLA 181

Query: 185 RAYAEACSTGLRLRIAQKSVSLQQDAVNVTDRLQRAGRAGAIDAGRARAQLQQLNAALPP 244
             Y +      + RI  +S+   + A+ +T        A  +D  RA+ QL +  A    
Sbjct: 182 TLYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQWDE 241

Query: 245 LKAERQGALYRLATLTGALPQDFPREVA-DCSEPPRVAGTLPVGDGAALLRRRPDIRQAE 303
           ++ +R    + +  L G    DF    +      P +   LP    + LL+RRPDI  AE
Sbjct: 242 IRGQRNLTEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLP----SHLLQRRPDIAAAE 297

Query: 304 RSLAASTARIGVATADLYPKITL-GLSGSSVGHADGFGRKDTFAWSLGPLISWTVPNTGV 362
           R + A+ A IGVA A  YP  +L GL G                W+LGPL++  + + G 
Sbjct: 298 RRVFAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGR 357

Query: 363 VQSHIAQAEAGTRAALAKFDGTVLTALRETETALATYARELDRRAA-LQASRDESAKVAA 421
           + ++  QA+A    A A +   VL A+RE E  LA   R+L + A   QA+ D +    +
Sbjct: 358 LSANERQAKAEFEEASAHYRSQVLKAVREVEDNLA-QLRDLQQEAQDEQAAADAAQHTQS 416

Query: 422 QARQLYQNGRTGYLDSLDAERSLAASEAALAASEAQLSDDQIVLFMALGGGWEPAD 477
            A   YQ G   YLD + A+ +   ++  L A + +     + L  ALGGGW  ++
Sbjct: 417 LAMNSYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGWHASN 472