Pairwise Alignments

Query, 492 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

Subject, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  286 bits (732), Expect = 1e-81
 Identities = 179/470 (38%), Positives = 256/470 (54%), Gaps = 15/470 (3%)

Query: 10  RLAS-LAAAAALAACAAVGPDYRQPPEALASQSAAGKPFAEAPANAA--PLPPHWWRLYH 66
           RLA+ L   AALAAC        QP  A  + +    P A  PA  +  PLP  WW LY 
Sbjct: 13  RLATALGMLAALAACG------HQPTPAEPAVALQADPLANMPAGVSKQPLPERWWALYQ 66

Query: 67  DPLLDKLVEQALAHNTDLRQAVANLERERAIEDEVAGAKYPSIGVNGGPSYGHVSGLSLL 126
           DP L++ V+QALAHN  L QA AN++   A   E    ++PS  +    +YG  +    L
Sbjct: 67  DPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQTL 126

Query: 127 QKGYEP--PNTFNYSAGASLSYQVDLFGQIRRAIEASQASTQAAEAALDLVRVNVAAGTA 184
            +  +   P+ + ++ G  L+YQVD++GQ+R AI+ ++   +A+ AALDLVR+ V A T 
Sbjct: 127 AEATDSNAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTT 186

Query: 185 RAYAEACSTGLRLRIAQKSVSLQQDAVNVTDRLQRAGRAGAIDAGRARAQLQQLNAALPP 244
           RAY + C+   RL  A++++     +V ++ R ++AG A A+D+ R     +Q+ A LP 
Sbjct: 187 RAYIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPM 246

Query: 245 LKAERQGALYRLATLTGALPQDFPREVADCSEPPRVAGTLPVGDGAALLRRRPDIRQAER 304
           L A RQ ALY L+ L+G   Q    E   C   P ++  LP GDG  LL RRPD+RQAER
Sbjct: 247 LSARRQMALYELSMLSG---QASVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAER 303

Query: 305 SLAASTARIGVATADLYPKITLGLS-GSSVGHADGFGRKDTFAWSLGPLISWTVPNTGVV 363
            L A+T    +  ADLYPK++ G S  SS  H    G      + +GPLI W  PN    
Sbjct: 304 ELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKAN 363

Query: 364 QSHIAQAEAGTRAALAKFDGTVLTALRETETALATYARELDRRAALQASRDESAKVAAQA 423
           ++ +++AEA  RA +A++ G  L+AL++   ALA Y  E  R  AL A+   S    A A
Sbjct: 364 RARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALA 423

Query: 424 RQLYQNGRTGYLDSLDAERSLAASEAALAASEAQLSDDQIVLFMALGGGW 473
           +  Y+ G    L  LD+ER + +  A    +  +L+  Q+ LF ALGG W
Sbjct: 424 QGNYRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473