Pairwise Alignments

Query, 409 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

Subject, 414 a.a., putative multidrug efflux MFS transporter from Pseudomonas putida KT2440

 Score =  125 bits (315), Expect = 2e-33
 Identities = 108/393 (27%), Positives = 172/393 (43%), Gaps = 21/393 (5%)

Query: 20  LALVTFSGTLAMHIFVPALPIAAANLGAGIGAMQMTVSLYIFGLAVGQLVYGPLADRFGR 79
           LAL      LA    +PA+P+  ++L A    +   ++LY+ G  V Q + GPLADR+GR
Sbjct: 19  LALFELLTYLASDAVMPAMPVVVSDLDASPEYIPHALNLYLLGGVVLQWLIGPLADRYGR 78

Query: 80  RPVLLCGLAIYCVAGLAAALAPEVHALITARLFQAIGGCAGLVLGRSIVRDTAEPQEATR 139
           RP+LL G A + +A LA     ++      RL Q IG    + +    + +     +A R
Sbjct: 79  RPLLLVGCAFFGLACLATFWVQDIGLFNLLRLLQGIGLGFVVTVSYPALNEAFSEADAVR 138

Query: 140 RLALMNLMVTIGPSLAPLIGGALATALGWRSIFYALFGLGVVGFLFTWRMLPETGAPGAA 199
            +AL+  +  + P L PL+G  L   L WR +F A     V+ +L  +R++PET      
Sbjct: 139 MMALLANIALLSPLLGPLVGTLLLQWLDWRWLFVAFAIGAVLTWLLLYRLMPET----LG 194

Query: 200 VNARD-------------LARNYGKLLRSPAFLGFSVGGGCATTSMYAFIASAPFIFVDQ 246
           V  RD             L   YG+LL +  F+  S   G     +  +I  +P + +  
Sbjct: 195 VERRDGSRLAFTPIHLLPLLAGYGQLLGNRRFVAGSAALGLVGLPLIGWIGLSPVLLIHD 254

Query: 247 LHRPAHEAGIYLAILVSGVWLGSFLTSHLISRVRVDRLMIRSNALSVAAAFVLLGAALGD 306
                 E  ++   +  G+ LG+ + + +  R  +  L +R       A   L+  A   
Sbjct: 255 EGLSTLEYALWQLPVFCGLILGNLIINRIADRYPLPAL-VRGALWPYLAGLCLMVLATWY 313

Query: 307 HLSVPLIVACMFLFTVGAGMASPAALTQAISVNPQVIGSASGLYGFTQMAV---GALCTA 363
             SV  +VA M L+ +G G+A+       +  + Q  G  S + G   +A+   G    A
Sbjct: 314 WPSVTSVVAGMSLYALGLGVANAVLYRMTLFSSEQSKGLVSAMLGMITIALLGFGGALLA 373

Query: 364 LAGMGHRNPALASAIVLAGAGIVAQLSFAVALR 396
           + G G      A A  +AGA  +  L F V  R
Sbjct: 374 MIGAGASLLHFALAAGVAGALALWPLWFVVGGR 406