Pairwise Alignments

Query, 409 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

Subject, 396 a.a., bicyclomycin/multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score =  179 bits (453), Expect = 2e-49
 Identities = 110/371 (29%), Positives = 189/371 (50%), Gaps = 13/371 (3%)

Query: 10  QRRPHAPLWLLALVTFSGTLAMHIFVPALPIAAANLGAGIGAMQMTVSLYIFGLAVGQLV 69
           Q    A +++L L+     L++ +++PALP+ +A  G   G+ QMT+S YI G A+GQL+
Sbjct: 5   QHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLI 64

Query: 70  YGPLADRFGRRPVLLCGLAIYCVAGLAAALAPEVHALITARLFQAIGGCAGLVLGRSIVR 129
           YGP+AD FGR+PV+L G  ++  A +A ALA  +  LI  R F  +   A  V+  +++R
Sbjct: 65  YGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMR 124

Query: 130 DTAEPQEATRRLALMNLMVTIGPSLAPLIGGALATALGWRSIFY-----ALFGLGVVGFL 184
           D    +E +R ++ + L+ TI P +AP++GG +   L W  IF+     A+    ++ FL
Sbjct: 125 DIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFL 184

Query: 185 FTWRMLPETGAPGAAVNARDLARNYGKLLRSPAFLGFSVGGGCATTSMYAFIASAPFIFV 244
               + PE   P    + R    N+  L R    L + +  G +   M++F+++ PF+++
Sbjct: 185 IKETLPPERRQP---FHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYI 241

Query: 245 DQLHRPAHEAGIYLAILVSGVWLGSFLTSHLISRVRVDRLMIRSN--ALSVAAAFVLLGA 302
           +  H      G Y A+ +  +++ +   S  + R+     M RS      + AA++++ A
Sbjct: 242 EINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALN-MFRSGLWIQFIMAAWMVISA 300

Query: 303 ALGDHLSVPLIVACMFLFTVGAGMASPAALTQAISVNPQVIGSASGLYGFTQMAVGALCT 362
            LG  L    +V  +  F     M S  A+   +   P + G+AS L G  +  +GA+  
Sbjct: 301 LLG--LGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVG 358

Query: 363 ALAGMGHRNPA 373
           AL  +   N A
Sbjct: 359 ALLSLATFNSA 369