Pairwise Alignments

Query, 317 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 291 a.a., putative drug/metabolite transporter from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 1e-27
 Identities = 91/270 (33%), Positives = 132/270 (48%), Gaps = 17/270 (6%)

Query: 22  ALLAVLATCWGASYTFIKIGVATIPPVTLIAARTLIAGALLLAVLRMRGVRLPKEPAMWG 81
           A L  LA  WGAS+ F++I    +  V     R  IA   L+ +L    VR   +  + G
Sbjct: 7   ARLLTLAAVWGASFLFMRIIAPELGTVPTAFFRVSIACLGLIVILAAARVRWNFQGKL-G 65

Query: 82  RFAVQACLNSVLPFTLIAWAERSVDAGLATILNSTSPIFIFLLGLGMGSAGRPTLQRFFG 141
              V   +NS +P T  + A + + AG + I N+T+P+   L+G+ +      TL +  G
Sbjct: 66  ACLVLGMINSGIPATFYSVAAQVLPAGYSAIFNATTPLMGVLVGV-LFFREPMTLAKLCG 124

Query: 142 VGAGLAGICLIVGLEALNGLGHSLL-AQLALVAAAVCYGCAAMFGRVF-KGLDPMVPAAG 199
           +  GL G+ ++ G   +  L  +LL   LA +AA  CYG A    R +  GLD  + A G
Sbjct: 125 IFLGLFGVGILSGAGPV-ALDMALLQGALACLAATTCYGFAGFLARRWISGLDSRLSALG 183

Query: 200 SMLSGTAMLLPASLFIDRPWT-LAPSAASVG------AVLALAVLSTALAFTIYFRLIRT 252
           SML  T ML P  LF    W+ L    AS G      ++L L +L TA A+ +YFRL+  
Sbjct: 184 SMLGATLMLTP--LF---GWSALTQPPASWGGWEVWLSLLGLGLLCTAFAYILYFRLLEE 238

Query: 253 LGPMSTSAQAYLRVPIGVAIGVLFLGETLA 282
           +GP+  S   +L    GV  G   L E L+
Sbjct: 239 IGPVKASTVTFLIPVFGVLWGAWLLNEPLS 268



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 164 SLLAQLALVAAAVCYGCAAMFGRVFKGLDPMVPAAGSMLSGTAMLLPASLFIDRP-WTLA 222
           S +A   L+  A  +G + +F R+       VP A   +S   + L   L   R  W   
Sbjct: 2   SPIALARLLTLAAVWGASFLFMRIIAPELGTVPTAFFRVSIACLGLIVILAAARVRWNFQ 61

Query: 223 PSAASVGAVLALAVLSTALAFTIYFRLIRTLGPMSTSAQAYLRVPI-GVAIGVLFLGE-- 279
                +GA L L ++++ +  T Y    + L P   SA      P+ GV +GVLF  E  
Sbjct: 62  ---GKLGACLVLGMINSGIPATFYSVAAQVL-PAGYSAIFNATTPLMGVLVGVLFFREPM 117

Query: 280 TLAPTAWIGLGCVVAGVVAMTMPEA 304
           TLA    I LG    G+++   P A
Sbjct: 118 TLAKLCGIFLGLFGVGILSGAGPVA 142