Pairwise Alignments

Query, 400 a.a., Uncharacterized MFS-type transporter YtbD from Variovorax sp. SCN45

Subject, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  282 bits (722), Expect = 1e-80
 Identities = 163/380 (42%), Positives = 228/380 (60%), Gaps = 10/380 (2%)

Query: 5   LLALTLSAFAIGTTEFVIVGLIPTVAADLHIGLPSAGLLVSLYALGVAIGAPVLTALTGK 64
           L+AL + AF IG TEF  +G++P++A DL + +P+AGLLVS YA+GV IGAP++T  T K
Sbjct: 7   LVALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVK 66

Query: 65  LPRKALLLSLMALFTVGNLLAWQAPSYESLIAARVLTGLAHGVFFSIGSTIATGLVPKEK 124
           +PR+ LL+ LMA+FT+GNL++  A  Y SL+ ARV+T L HG FF IGS +A  +VP EK
Sbjct: 67  IPRRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPPEK 126

Query: 125 AASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETFLAVSALGVVAFIGSWVFVPSNIRH 184
            A A+A MF GLT+A + GVPL T++G+  GWR  F  ++ LG+VA    W  +P N+  
Sbjct: 127 RAGAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALP-NVAS 185

Query: 185 TPPASLAQQAKVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILTEVSGFSAGAVGWVMLV 244
                   + +VL    +L     T +G    F  FT++APIL   +  S   V  ++++
Sbjct: 186 PKGEGAMAEIRVLGRRPVLAALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAMLVL 245

Query: 245 YGVSVAVGNIWGGKLADRRGPIPALKIIFALLAAVLLLFNFAAPHKWLALLAVLMWGAVA 304
           +GV + +GN+WGGK AD R     L +  A L AVLL+F           LA+L+WGA +
Sbjct: 246 FGVGLTLGNVWGGKAAD-RSIDRTLILSLAGLIAVLLVFPLVLDWPLPTALAILVWGAAS 304

Query: 305 FGNVPGLQVYVVKQAERFTPQAVDVASGLNIAAFNLGIA-GAAWAGGLIVTHLGLMHTPW 363
           F  VP LQ+ V++ A+     A ++AS +NI AFNLG A GAA  G +I   LG      
Sbjct: 305 FALVPPLQMRVMEAAK----DAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISL 360

Query: 364 IGALVV---LVSLALTQWSG 380
            GA +    LV + L  W G
Sbjct: 361 AGAAMAALGLVLVLLFAWRG 380