Pairwise Alignments

Query, 246 a.a., Putative transmembrane protein from Variovorax sp. SCN45

Subject, 233 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  262 bits (670), Expect = 4e-75
 Identities = 130/243 (53%), Positives = 162/243 (66%), Gaps = 12/243 (4%)

Query: 4   GAASSSFEDIDALAGEYVLGTLSADARAAVEARMRDEPALRDAVQAWEARLLPLASLAAP 63
           G    S E++D+LAGEYVLGTLS +  A    R+R +PALR AV AWEARLL L +L+ P
Sbjct: 3   GMKPDSAEELDSLAGEYVLGTLSPEQYAVTAERLRTDPALRAAVDAWEARLLELTALSTP 62

Query: 64  ADPSPALWSRIERTLGSAAAASPNARKAEPARASGFANWWNNLQLWRGLAAGGFAAAALM 123
             PSP LW RI+R+L    A    AR            WW  L LW+GL+A G AA+ L+
Sbjct: 63  QPPSPRLWRRIQRSLDELPAPRMQAR------------WWQRLGLWQGLSAAGLAASLLL 110

Query: 124 VAVLVTRPPPTPQYMVVLVAPQDKSPGWVIQTTSSRQLSLVPLGTIEVPPQKTLQFWTKA 183
              L+T P  T +Y+VVLVAP  ++PGWV+Q + S  + L+PLG  +VP    LQFWTK 
Sbjct: 111 AFTLLTTPASTTEYLVVLVAPNSQAPGWVVQASDSHMIELLPLGKDKVPDGMALQFWTKG 170

Query: 184 DQWRGPVSLGLVKQGQTLRIPIDKLPPLEPNQLFELTLEPENGSPIDRPTGPIQFIGRAV 243
           +QWR PVSLGLVK G+  R+P++ LPPLE NQLFELTLE   GSP   PTGP++FIGRAV
Sbjct: 171 EQWRAPVSLGLVKPGEPYRVPLESLPPLEANQLFELTLEKAGGSPTGLPTGPVKFIGRAV 230

Query: 244 KVL 246
           KV+
Sbjct: 231 KVI 233