Pairwise Alignments

Query, 294 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Variovorax sp. SCN45

Subject, 287 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

 Score =  278 bits (712), Expect = 8e-80
 Identities = 150/287 (52%), Positives = 183/287 (63%), Gaps = 11/287 (3%)

Query: 1   MRIRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAEGVDF 60
           M +RFTKM G GNDF+VLD       +     +   DRH GVG DQ+L V       VDF
Sbjct: 12  MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEAPNNPEVDF 71

Query: 61  QYVIHNADGGEVEQCGNGARCFMRFVSEHKLTDKTEVRVQTLAGVIAPRMGADGRVTVDM 120
           +Y I NADG EVEQCGNGARCF RFV + +LT K  +RV+T +G+I   +  DG+V+VDM
Sbjct: 72  RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVDM 131

Query: 121 GAPVFETERVPFDTAGLDPQPEGAWQKWHLALGTRAGSAIVSVAVLSMGNPHAVQVVDNV 180
           G P F    +PF     D Q         L         + S+A +SMGNPHAV  VD+V
Sbjct: 132 GPPRFIPAEIPFVA---DAQA--------LNYPLEVDGQLHSIAAVSMGNPHAVLRVDDV 180

Query: 181 DTAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRTHIKLRVFERGAGETLACGTGACAAVVA 240
            TAPV E GP+IE+HPRFPQRVNAGF+QV+DR    LRV+ERGAGET ACGTGACAA VA
Sbjct: 181 QTAPVHELGPKIENHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVA 240

Query: 241 GIRLGLLERRVDVQTHGGVLTIEWQGEGQPVLMTGPATTVFEGDIEV 287
            I  G ++  V +   GG L IEW G G+PV+MTGPA  V+EG + +
Sbjct: 241 AISQGWMDSPVSLDLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQVRL 287