Pairwise Alignments

Query, 294 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Variovorax sp. SCN45

Subject, 268 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 1e-35
 Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 26/279 (9%)

Query: 3   IRFTKMQGAGNDFVVLDETRGTLGLSAAQYRFLADRHFGVGADQILTVRPSPAEGVDFQY 62
           ++F K   AGND++V  +       S      + DRH G+G+D IL   P   EG     
Sbjct: 1   MQFYKYHAAGNDYLVYRDCV-PFDCSKPMISRICDRHRGLGSDGILV--PVIKEGERLSV 57

Query: 63  VIHNADGGEVEQCGNGARCFMRFVSEHKLTDKTEVRVQTLAGVIAPRMGADG-RVTVDMG 121
            I+N DG + E+ GNG R   R++ +  +   +   + T  G++  ++  +G R+++ MG
Sbjct: 58  RIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAMG 117

Query: 122 APVFETERVPFDTAGLDPQPEGAWQKWHLALGTRAGSAIVSVAVLSMGNPHAVQVVDNVD 181
              F       +TA      +G   + H                +SMGNPH V  VD   
Sbjct: 118 QAAFA------NTAAFTVDVDGTPLQLH---------------PVSMGNPHCVVFVDQPT 156

Query: 182 TAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRTHIKLRVFERGAGETLACGTGACAAVVAG 241
                + GP IE    FP R N  F++V+DR  ++++++ERG G TL+ GT +CAA    
Sbjct: 157 ETLARQLGPLIERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVS 216

Query: 242 IRLGLLERRVDVQTHGGVLTIEWQGEGQPVLMTGPATTV 280
            RLGL+  RV V   GGV+ IE   +   VLM GP   V
Sbjct: 217 RRLGLVGPRVAVNMAGGVIMIELD-DDYHVLMQGPVCRV 254