Pairwise Alignments

Query, 338 a.a., Site-specific tyrosine recombinase XerC from Variovorax sp. SCN45

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score =  165 bits (418), Expect = 1e-45
 Identities = 111/306 (36%), Positives = 159/306 (51%), Gaps = 18/306 (5%)

Query: 25  VEKYLEHVRVERRLAARTVELYAFHLKSLTDHAAEAKLSLDHVQTAHIRRWMAQLHAAGR 84
           ++++L+ + +E+ L+  T   Y   L        E  +SL       I   +A     G 
Sbjct: 9   IDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAWRLDQGY 68

Query: 85  EPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHAPKAGKPLPKALGVDDAVRLAELYDP 144
           +PR  A  LS  R F+R+L  E LV  +P   V  P+ GKPLPK+L   D   L  L  P
Sbjct: 69  KPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEAL--LQAP 126

Query: 145 EADPWTEARDSAIVEMLYGCGLRVSELTGLDAQASSSARGWVDLDAGDANVLGKGSKRRI 204
           +       RD A++E+LY CGLRV+EL  L           V+L  G   V+GKGSK R+
Sbjct: 127 DLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQ-------VNLRQGVLRVMGKGSKERL 179

Query: 205 VPMGSKASEAVRDWLA-VRGDCAALATSHLRDPRAAAALFISAKGVRMSSQAVWKLLRER 263
           VPMG +A      WL   + D  A     L + R +  LF S +G +M+ Q  W  ++  
Sbjct: 180 VPMGEEAVV----WLERYQRDGRA----ELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHH 231

Query: 264 SLKAGLAAPVHPHMLRHSFASHVLQSSSDLRAVQELLGHASISTTQVYTRLDFQHLAKVY 323
           +  AG+  P+ PH LRH+FA+H+L   +DLR VQ LLGH+ +STTQ+YT +    L +++
Sbjct: 232 ARVAGIDKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLH 291

Query: 324 DAAHPR 329
              HPR
Sbjct: 292 AQHHPR 297