Pairwise Alignments

Query, 404 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) from Variovorax sp. SCN45

Subject, 702 a.a., predicted methyltransferase (NCBI) from Escherichia coli BW25113

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 39/258 (15%)

Query: 112 VDRYGDTLVAQFLSA--------GVERWKDVLADALLKATGLAKLYERSDASGREREGLK 163
           VDRY D +V Q  +           +R  D++A A +   G+A    +     RER+  K
Sbjct: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIA-ATISVLGIAP--NKLVLKTRERQKGK 488

Query: 164 PVTGWLRGDGPTEIVIREHGWKLSLDIATGHKTGFYLDQRDSRQRFAELAQHRRFRRVLN 223
                L G+    + + E+   L +++     TG +LD R +R+   ++++ + F   LN
Sbjct: 489 NQYQKL-GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF---LN 544

Query: 224 CFCYTGGFTVAALAGLKAANALQGAQLVSVDSSLPALERARGHLALNGFEGQGIEAEFLD 283
            F YTG  TV   AGL  A +       +VD S   LE A  +L LNG  G+      + 
Sbjct: 545 LFSYTGSATVH--AGLGGARS-----TTTVDMSRTYLEWAERNLRLNGLTGRA--HRLIQ 595

Query: 284 ANVNTVLREFIDQGRTFDAIVLDPPKFAPTAAHAERAARAYKDINR--LAL-----KLLE 336
           A+    LRE  +Q   FD I +DPP F    ++++R   A+ D+ R  LAL     +LL 
Sbjct: 596 ADCLAWLREANEQ---FDLIFIDPPTF----SNSKRMEDAF-DVQRDHLALMKDLKRLLR 647

Query: 337 PGGVLLTFSCSGGISADL 354
            GG ++  +   G   DL
Sbjct: 648 AGGTIMFSNNKRGFRMDL 665