Pairwise Alignments
Query, 307 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) from Variovorax sp. SCN45
Subject, 315 a.a., Ribosomal RNA small subunit methyltransferase H from Pseudomonas putida KT2440
Score = 274 bits (701), Expect = 2e-78
Identities = 159/317 (50%), Positives = 212/317 (66%), Gaps = 20/317 (6%)
Query: 1 VTTPWTHTTVLLNEAVEALLSGSTAATGTYVDATFGRGGHARAILSRLAPEGRLIAFDKD 60
+ + + H TVLL+EAVEAL + A G Y+D TFGRGGH+R ILS+L P+GRL+ FDKD
Sbjct: 3 IDSGFNHITVLLDEAVEAL---ALRADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKD 59
Query: 61 AEAVA--EAARISDARFSIRHQGFRSLGELPDA-----SIDGLLMDLGVSSPQIDNPVRG 113
+A+A +A D RF I + F LG A + G+L+DLGVSSPQ+D+P RG
Sbjct: 60 PQAIATGQALAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERG 119
Query: 114 FSFRFDGPLDMRMDTTRGESVAEWLATAELQQIAEVIRDYGEERFAVQIAKAIVARRQER 173
FSF DGPLDMRM+ +G S AE++ATA +++IA V ++YGEERFA ++A+A+V RR E+
Sbjct: 120 FSFLNDGPLDMRMNPDQGVSAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERR-EK 178
Query: 174 GPISTTTELAELVAGTVKTREQGQNPATRTFQAFRIFINAELEELQQALEASLSVLKPGG 233
P + T +LAE++ E+G+NPATR FQ RI +N EL +L+ LEA+L L+ GG
Sbjct: 179 QPFTRTADLAEVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGG 238
Query: 234 RLAVISFHSLEDRIVKQFIAKHSKEVYD---RRAPFA----APKVMKLNALERIKPSQAE 286
RLAVISFHSLEDRIVK F+ K K D R P PK+ + + S+AE
Sbjct: 239 RLAVISFHSLEDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIKLIGKAQ--FASEAE 296
Query: 287 VSGNPRSRSAILRVAER 303
+ NPRSRSA++RVAE+
Sbjct: 297 LKANPRSRSAVMRVAEK 313