Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6-diaminopimela te ligase (EC 6.3.2.13) from Variovorax sp. SCN45

Subject, 487 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  228 bits (582), Expect = 3e-64
 Identities = 169/484 (34%), Positives = 241/484 (49%), Gaps = 45/484 (9%)

Query: 26  DSRAVGAGDIFVAWPGAATDGRKHVASALAQGAAVCLVEH-EGVEPFGFDGDERIVSYPG 84
           DSR V  GD+FVA  G   DG  ++  A+A GA   + E   G  P G    + + S   
Sbjct: 30  DSRKVEEGDVFVATKGTQVDGHAYIDKAIASGAKAIVCEALPGELPKGITYVQVVDSAKA 89

Query: 85  LKAATGPIASAFYDNPSALLDVLAVTGTNGKTSTAWWLAESLSTLRAAGGVRVMKPDGTM 144
           L    G +AS F+D+PSA L V+AVTGTNGKT+    L      L    G+         
Sbjct: 90  L----GIMASNFFDHPSAQLKVVAVTGTNGKTTCVTLLHRLFMELGYMVGM--------- 136

Query: 145 QRDAPSPCAVMGTLGVGVPPELTYTGLTTPDPVMMQRELRSLVERGFGACAIEASSIGIA 204
                     + T+   +  E+     TTPD V + R +  +V  G   C +EASS  I 
Sbjct: 137 ----------LSTVENKINDEVIAATHTTPDSVAINRLMAKMVAEGCTHCFMEASSHAIV 186

Query: 205 ERRLDGAQIAVAVFTNFTQDHLDYHGSMDAYWQAKAELF-RWPGLRAAVINIDDTHGASL 263
           + R+ G Q++ AVFTN + DHLDYHG+ D Y +AK +LF   P    A++N DD  G  +
Sbjct: 187 QERMAGLQLSGAVFTNISHDHLDYHGTFDEYIKAKKKLFDELPKGAFALVNADDKRGMVM 246

Query: 264 CANLIDAGIGALDVWTVSAGGK-PARLVARDIGYDAQGLQFSVAEHGTAAVERLSTGLIG 322
             N              + G K P    A+ +    QGL+  +  +G  A  R    +IG
Sbjct: 247 MQN--------TKASKRTFGLKYPTDFKAKVLSNTLQGLELDL--NGRQAWFR----MIG 292

Query: 323 QYNVANLLGVLGTLRALGLTLAQAAAACANLTSVPGRMDRAGTGDGAPLAVVDYAHTPDA 382
           ++N  N+  VLG    LG    +     +++    GR D+    +G   A+VDYAHTPDA
Sbjct: 293 EFNAYNITSVLGVALLLGEEEEEVLMQLSSIKGAQGRFDQLHV-EGI-TAIVDYAHTPDA 350

Query: 383 LDKALIGLRPLAQQRGGALWCLFGCGGDRDPIKRPMMAAVAERQADRVIVTSDNPRSEKP 442
           L+  L  ++ + +  G  +  + GCGG+RD  KRP+MA +A   +D+V++TSDNPR E P
Sbjct: 351 LENVLKTIQGV-RTGGEKVITVVGCGGNRDKAKRPVMAKIATDMSDKVVLTSDNPRDEDP 409

Query: 443 DAIISQVLLGFSRPEVAQ--VQPDRALAIADAIAQAAPQDVVLIAGKGHEAWQEIAGQRI 500
             I+  +  G +     +  V  DR  AI  A   A   D++L+AGKGHE +QEI G + 
Sbjct: 410 MEILRDMETGVNPVAYKKTVVIADRKEAIKTACVMAEKGDIILVAGKGHETYQEIKGVKH 469

Query: 501 EFSD 504
            F D
Sbjct: 470 PFDD 473