Pairwise Alignments

Query, 706 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC 6.3.2.9) from Variovorax sp. SCN45

Subject, 496 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 5e-15
 Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 45/271 (16%)

Query: 316 SVLAITGTNGKTTVTSLTGQLVERGGKTVAVAGNIGPTLLDTLWAH--------IDADTL 367
           +++ +TGTNGKT+VT L  Q ++  G+   + G +G      L +             TL
Sbjct: 103 NLVGVTGTNGKTSVTQLVAQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTL 162

Query: 368 PDVW-------VLELSSFQLDG--VQDFEPTAATVLNLTQDHLDWHGDMSAYAAAKARIF 418
            D+         +E+SS  L+   V   E   A + NL++DHLD+HG M AY AAKA++F
Sbjct: 163 NDLKKGGARAVAMEVSSHALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLF 222

Query: 419 GARGL--MILNRDDAGVMAMLPAPVKVKLQRPQIRTHVTFGAAMPLRPGDYGIERVNGMA 476
               L   ++N DD      L A    +     I T +            Y +E      
Sbjct: 223 AWPSLRCQVVNLDD-DFGRRLAADFARRPSVDHIETRLL----------SYSLESPEASL 271

Query: 477 WLVRALEADETQKRKRGAVVEEEIFLQRLMPADALRIRGRHNAMNALAALALASAAGCPL 536
           +   A+ +D+  +        E I   +L+        GR N  N LAA+A   A    L
Sbjct: 272 FCREAVFSDDGVRATLVTAQGERILRSQLL--------GRFNLSNMLAAVATLLALDYAL 323

Query: 537 GPMLYGLREYHGEPHRVE-------PIAIVD 560
             +L    +  G   R++       P+ +VD
Sbjct: 324 DEILKVTPQLQGPVGRMQRLGGGDKPLVVVD 354