Pairwise Alignments

Query, 323 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Variovorax sp. SCN45

Subject, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score =  276 bits (706), Expect = 5e-79
 Identities = 148/310 (47%), Positives = 201/310 (64%), Gaps = 11/310 (3%)

Query: 6   PKLFGKVAVLFGGSSAEREISLMSGTGVLEALRSRGVDAHAFDPSQRELADLKREGFARC 65
           P  FG+VAVLFGG SAERE+SL SG  VL+AL+S GV+A   D     +A L+ E   R 
Sbjct: 14  PADFGRVAVLFGGKSAEREVSLKSGNAVLDALQSAGVNAFGIDVGDDFIARLQAEKIDRA 73

Query: 66  FVALHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIWQADGLPTPKYVRLA 125
           F+ LHGR GEDG++QG LE  GIPYTGSGV+AS++AMDK+ TK++W + G+PTP++  L 
Sbjct: 74  FIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWHSLGIPTPRHSVLC 133

Query: 126 FDQQSREQIMAVPDVLGLPLIVKPPREGSSIGVTKVEGYSQMQDAITLSAKYDADVLCEE 185
               S +  ++    LGLPLIVKP  EGSSIG+ KV   +++ DA   ++ YD+ VL E+
Sbjct: 134 ----SEDDCISAAKELGLPLIVKPAHEGSSIGMAKVNSAAELIDAWKAASTYDSQVLVEQ 189

Query: 186 FIEGEEVTCAVLGHGLDARALPVVRIAAPEGAYDYQNKYFTDDVKYQCPSGLPDAEEHEI 245
           +I+G E T A     L  + LP + +  P   YDY  KY   D +Y+ P GL  ++E E+
Sbjct: 190 WIQGPEYTIAT----LRGQVLPPIALGTPHTFYDYDAKYLASDTQYRIPCGLDASKEQEL 245

Query: 246 QRIALAAYRTLGCRGWGRADVMIRASDRKPF-LLEMNTSPGMTSHSLVPMSARAAGIAYE 304
             +   A   LG  GW RADVM    D+  F  LE+NT+PGMT HSLVPM+ARAAG+ ++
Sbjct: 246 MDLTAKACEALGIAGWARADVM--QDDQGDFWFLEVNTAPGMTDHSLVPMAARAAGLDFQ 303

Query: 305 ELCVRVLASA 314
           +L + +LA +
Sbjct: 304 QLVLAILADS 313