Pairwise Alignments

Query, 323 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Variovorax sp. SCN45

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  280 bits (716), Expect = 3e-80
 Identities = 150/313 (47%), Positives = 202/313 (64%), Gaps = 9/313 (2%)

Query: 2   SLQDPKLFGKVAVLFGGSSAEREISLMSGTGVLEALRSRGVDAHAFDPSQRELADLKREG 61
           S  D K FG+VAVL+GG SAERE+SL SG  V++AL + GVD  A D     LA L+ E 
Sbjct: 10  STLDVKAFGRVAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDVGDDLLARLQSEK 69

Query: 62  FARCFVALHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIWQADGLPTPKY 121
             R F+ LHGR GEDG++QG LE LGIPYTGSG++AS++AMDK+ TK++WQ+ G+PTP++
Sbjct: 70  IDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTPRH 129

Query: 122 VRLAFDQQSREQIMAVPDVLGLPLIVKPPREGSSIGVTKVEGYSQMQDAITLSAKYDADV 181
             LA    S    +     LG PLIVKP  EGSSIG+ KV    ++  A   +AKYD+ V
Sbjct: 130 AVLA----SESDCLQASTELGFPLIVKPAHEGSSIGMAKVNSTQELVAAWQDAAKYDSQV 185

Query: 182 LCEEFIEGEEVTCAVLGHGLDARALPVVRIAAPEGAYDYQNKYFTDDVKYQCPSGLPDAE 241
           L E++I G E T AV    L  + LP + +  P   YDY  KY  +D +Y+ P GL   +
Sbjct: 186 LVEQWIHGPEFTIAV----LRGQVLPPIALGTPHVFYDYDAKYIVNDTQYRIPCGLDSVK 241

Query: 242 EHEIQRIALAAYRTLGCRGWGRADVMIRASDRKPFLLEMNTSPGMTSHSLVPMSARAAGI 301
           E E+  +   A   +G  GWGR DVM +    + +LLE+NT+PGMT HSLVPM+ARAAG+
Sbjct: 242 EQELIDLTARACDAIGIEGWGRLDVM-QDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGL 300

Query: 302 AYEELCVRVLASA 314
            +++L + +LA +
Sbjct: 301 DFQQLVLAILAES 313