Pairwise Alignments

Query, 290 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 8e-18
 Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 17/218 (7%)

Query: 62  RGCNITVPFKFEAAALAQHTSERATLAQAVNTLRFEADGGIHADNTDGIGLVNDIVRNAG 121
           RGC +++PFK  A AL     +      ++NT+    DG + A NTD I  +  +++   
Sbjct: 61  RGCGVSMPFKEAAIALVDELDDSVQAIDSLNTI-VNTDGHLKAYNTDYIA-IEQLLKKHA 118

Query: 122 VPLQGKALLLIGAGGAAAGVLGPLLDAGAARVVVANRTVDKAIELVRRHAAVALRHGASL 181
           VP +     L G+GG A  V   L D G A  V+  R      E   R  A  L +    
Sbjct: 119 VP-KDSTFALRGSGGMAKAVASALRDGGYANGVIVARN-----EAAGRALAQNLGY---- 168

Query: 182 EAWALDKVPGAFDVVVNATASSLAG----DAVPVSADVLRPGGLAVDMMYGPAAAGFMAW 237
            AW  +       +++N T   + G    DA+   AD +       D++  P+    +  
Sbjct: 169 -AWRAELADMRPQMLINVTPIGMTGGAEADALAFDADAVDVAETVFDVVAIPSETPLIVR 227

Query: 238 AEAHGAVARDGLGMLVEQAAESFEIWRGVRPPSAQVLA 275
             A G     GL ++  QA E F ++ GVRP   Q  A
Sbjct: 228 GRAQGKRVITGLEVIAIQALEQFVLYTGVRPTDEQFQA 265