Pairwise Alignments

Query, 290 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 282 a.a., putative quinate/shikimate dehydrogenase from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 15/280 (5%)

Query: 6   VIGNPVEHSRSPRIHARFAELCGQQMDYGRRLVPIGAFAEGIAAFRA--EAAERGDTARG 63
           +IG  ++ SR+P +H    +   Q + Y  RL+         +A     EAA+      G
Sbjct: 10  LIGRGIQLSRTPALHEHEGD--AQALRYLYRLIDADQLQLDDSALPGLLEAAQHTGFT-G 66

Query: 64  CNITVPFKFEAAALAQHTSERATLAQAVNTLRFEADGGIHADNTDGIGLVNDIVRNAGVP 123
            NIT PFK     L    S+ A    AVNT+  + DG     NTD +G    + R  G+P
Sbjct: 67  LNITYPFKQAILPLLDELSDEARGIGAVNTVVLK-DGKRVGHNTDCLGFAEGLRR--GLP 123

Query: 124 -LQGKALLLIGAGGAAAGVLGPLLDAGAARVVVANRTVDKAIELVRRHAAVALRHGASLE 182
            +  + ++ +GAGGA + V   LL  G  R+V+      +A  LV     +    GA   
Sbjct: 124 DVARRQVVQMGAGGAGSAVAHALLGEGVERLVLFEVDATRAQALVDN---LNTHFGAERA 180

Query: 183 AWALDKVPGAF--DVVVNATASSLAG-DAVPVSADVLRPGGLAVDMMYGPAAAGFMAWAE 239
               D        D +VN T   +A     P+  ++L P     +++Y P     +  A 
Sbjct: 181 VLGTDLATALAEADGLVNTTPVGMAKLPGTPLPVELLHPRLWVAEIIYFPLETELLRAAR 240

Query: 240 AHGAVARDGLGMLVEQAAESFEIWRGVRPPSAQVLAELRS 279
           A G    DG  M V QA ++FE++ G +  +A++ A   S
Sbjct: 241 ALGCRTLDGSNMAVFQAVKAFELFSGRQADAARMQAHFAS 280