Pairwise Alignments

Query, 290 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

 Score =  224 bits (571), Expect = 2e-63
 Identities = 135/284 (47%), Positives = 170/284 (59%), Gaps = 14/284 (4%)

Query: 1   MDLYCVIGNPVEHSRSPRIHARFAELCGQQMDYGRRLVPIGAFAEGIAAFRAEAAERGDT 60
           MD Y V GNP+ HS+SP IH  FAE  GQ ++Y   L P+  F++    F  + +     
Sbjct: 1   MDQYVVFGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFKQGS----- 55

Query: 61  ARGCNITVPFKFEAAALAQHTSERATLAQAVNTLRFEADGGIHADNTDGIGLVNDIVRNA 120
             G N+TVPFK EA  L    + RA  A AVNTL   ADG +  DNTDG GLV D+  NA
Sbjct: 56  --GGNVTVPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNA 113

Query: 121 GVPLQGKALLLIGAGGAAAGVLGPLLDAGAARVVVANRTVDKAIELVRRHAAVALRHGAS 180
           GV L GK +L++GAGGA  GVL P+L      +V+ANRTV+KA +L R    +     AS
Sbjct: 114 GVELAGKRILILGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDELG-PVVAS 172

Query: 181 LEAWALDKVPGAFDVVVNATASSLAGDAVPVSADVLRPG-GLAVDMMYGPAAAGFMAWAE 239
             AW  + V    DV++NAT++SLAG+  P++  ++  G  +  DMMYG     F  WA 
Sbjct: 173 GFAWLQEPV----DVIINATSASLAGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWAT 228

Query: 240 AHGAV-ARDGLGMLVEQAAESFEIWRGVRPPSAQVLAELRSSLA 282
             GA    DGLGML EQAAE+F IWRGVRP +A VLAELR  LA
Sbjct: 229 KLGAAKVLDGLGMLAEQAAEAFFIWRGVRPDTAPVLAELRRQLA 272