Pairwise Alignments

Query, 685 a.a., Exoribonuclease II (EC 3.1.13.1) from Variovorax sp. SCN45

Subject, 814 a.a., ribonuclease R from Enterobacter asburiae PDN3

 Score = 48.1 bits (113), Expect = 2e-09
 Identities = 76/326 (23%), Positives = 119/326 (36%), Gaps = 70/326 (21%)

Query: 246 SIDDSQTTEIDDALSVQGLGSGTVTVGIHIAAPALALTPGSAIDNVARARMSTVYMPGYK 305
           +ID     + DDA+  +    G   + + IA  +  + P + +DN AR+R ++VY P   
Sbjct: 270 TIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPHTPLDNEARSRGTSVYFPSQV 329

Query: 306 ITMLPDDVVNTYTLLEGGDRPAVSLYARFDEATLELQGTETKLERVPIVANLRHDQLDTF 365
           + MLP+ + N    L     P V       E T+  +G  T  +    V +       T 
Sbjct: 330 VPMLPEVLSNGLCSL----NPQVDRLCMVCEMTISTKGRLTGYKFYEAVMSSHARLTYTK 385

Query: 366 VTQPWLEDASFQSEGTPEAAAQLRAPLSFLFRLAKQLKAQREVVRGKPENFNRPDYNFRL 425
           V      D   + +  P     L   +  L  L K L   RE   G   +F   +  F  
Sbjct: 386 VWHMLQGDQDLREQYAP-----LVKHIEELHNLYKTLDQAREERGG--ISFESEEAKF-- 436

Query: 426 VGNEGNEPTGNEQVQISTRQRGAPLDLIVSEAMILANSSWGGWLGELGVPGLYR------ 479
           + N        EQ Q +   +      ++ E MILAN S   ++ +   P L+R      
Sbjct: 437 IFNAERRIERIEQTQRNDAHK------LIEECMILANISAARFVEKAKEPALFRIHDKPT 490

Query: 480 ------SQASLAP-GIKVRMGTRALP---------------------------------- 498
                  ++ LA  G+++  G +  P                                  
Sbjct: 491 TEAITSFRSVLAELGLELPGGNKPEPRDYAELLESIGDRPDAEMLQTMLLRSMKQAIYDP 550

Query: 499 ----HAGLGVKSYAWSTSPLRRYTDL 520
               H GL ++SYA  TSP+RRY DL
Sbjct: 551 ENRGHFGLALQSYAHFTSPIRRYPDL 576