Pairwise Alignments

Query, 384 a.a., Rod shape-determining protein RodA from Variovorax sp. SCN45

Subject, 404 a.a., lipid II flippase from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 4e-39
 Identities = 88/299 (29%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 83  LYAMGVALLVAVALFGITKKGAQRWINLGMV-IQPSEILKIAMPLMLAWWFQRREGQLRP 141
           L A G+ +LV V   G    G+ RWI      +QPSEI K+ + + LA +  RR+ ++R 
Sbjct: 93  LGAFGLLVLVLVPGIGREVNGSMRWIGFSFFNVQPSEIAKVFVVIYLAGYLVRRQTEVRE 152

Query: 142 --LDFVVATVLLAVPVGLIMKQPDLGTSLLVLAAGLAVIFFAGLPWKLIVPPVVIGAVAI 199
             + F    ++L     L++ +PD G +++++ A  A++F  G+        VV+  +A+
Sbjct: 153 TWMGFFKPFIVLLPMAALLLMEPDFGATVVMMGAAAAMLFLGGVGLFRFSLMVVLAVLAV 212

Query: 200 TLIVSFESRLCADGVDWRVLHDYQKQRVCTLLDPSKDPLGKGFHIIQGMIAIGSGGVGGK 259
            ++V  +               Y+  R+ T  DP  D  G G+ + Q +IA G G   G 
Sbjct: 213 FVLVQAQP--------------YRMARLITFTDPWADQFGSGYQLTQALIAFGRGEWLGV 258

Query: 260 GFMQGTQTHLEFIPERTTDFIFAAYSEEFGLMGNLMLISAFILLIFRGLAI---ATNATT 316
           G     Q    ++PE  TDF+F+  +EE G++G+L+ ++ F+ +  R L I   A  A  
Sbjct: 259 GLGNSVQKQF-YLPEAHTDFVFSVLAEELGVVGSLLTVALFVFVTVRALYIGLWAEKAKQ 317

Query: 317 LFSRLLAGAVTMIFFTYAFVNMGMVSGILPVVGVPLPFISYGGTAMVTLGLGLGILMSI 375
            F+  +A  +  ++     +N+G+  G+LP  G+ LPF+SYGG+++V     +G+L+ I
Sbjct: 318 FFAAYMAFGLAFLWIGQFLINIGVNVGLLPTKGLTLPFLSYGGSSLVICCACVGLLLRI 376