Pairwise Alignments

Query, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) from Variovorax sp. SCN45

Subject, 482 a.a., UDP-N-acetylmuramate--L-alanine ligase from Pseudomonas putida KT2440

 Score =  174 bits (441), Expect = 6e-48
 Identities = 138/482 (28%), Positives = 219/482 (45%), Gaps = 42/482 (8%)

Query: 3   IHILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFGAEQLKLSP 62
           IH +GI G  M G+A +    G+ V+G D     P++++L S G ++  G  AE    + 
Sbjct: 19  IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKA-SPVTERLESFGAEIFVGHRAENAATA- 76

Query: 63  DMFVIGNVVSRARLPDGSPKFPLMEAILDAGKPYTSGPQWLAEHVLQGRHVLAVAGTHGK 122
           D+ V+ + ++        P  P +   L+   P     + LAE +++ RH +AVAGTHGK
Sbjct: 77  DVLVVSSAIN--------PANPEVATALERRIPVVPRAEMLAE-LMRYRHGVAVAGTHGK 127

Query: 123 TTTTSMLAWVLEKGGKAPGFLVGGVPLDFGVSARLGDGTAFVIEADEYDTAFFDKRSKFV 182
           TTTTS+LA V   GG  P F++GG     G +A+LG     + EADE D       + F+
Sbjct: 128 TTTTSLLASVFAAGGLDPTFVIGGRLTAAGTNAQLGTSRYLIAEADESD-------ASFL 180

Query: 183 HYRPRTAVLNNLEFDHADIFD-DLAAIERQFHHLVRTVPSTGRLVVNATEESLRHVLSQG 241
           H +P  AV+ N++ DH   ++ D   +++ F   +  +P  G  V+   +  +R +L Q 
Sbjct: 181 HLQPMVAVVTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQ- 239

Query: 242 CWSELARFGAGGEWQAR-------GSHDAFDVLRQGEVIGRVEWELSGLHNQMNALAAIA 294
                  +G   E   R       G    F VLR+      V   + G HN +NALA IA
Sbjct: 240 VKRPTVTYGFSEEADIRAINVRQQGMQTHFTVLRRDREPLEVSVNMPGNHNVLNALATIA 299

Query: 295 AADHVGVPPAEAARALGSFRNVRRRMELRGTVERSGGSITVYDDFAHHPTAIRTTLDGLR 354
            A   G+      + L  F+ V RR ++ G +   GGS+ + DD+ HHPT +   +  +R
Sbjct: 300 IATDEGITDEAIVQGLSGFQGVGRRFQVYGELPVEGGSVMLVDDYGHHPTEVAAVIKAVR 359

Query: 355 NKLDAAGKKSERILAAFEPR--SNTMKLGVMAAQLPWSLEAADLSFCHTAGLDWDVAAAL 412
                 G  S R++  ++P   S T  L     Q+        L   + AG +    A  
Sbjct: 360 -----GGWPSRRLVIVYQPHRYSRTRDLYDDFVQVLGDANVLLLMEVYPAGEEPIPGADS 414

Query: 413 APMGERAQLAGAIEP--------LVNQIVAAARPGDHIVCMSNGGFGGVHDKLLAALKAA 464
             +    +  G ++P        L   +    R GD ++C   G  GG+  +L+ +   A
Sbjct: 415 RQLCHSIRQRGKLDPIYIERGAELAPLVKPLLRAGDILLCQGAGDVGGLAPQLMKSPLFA 474

Query: 465 AA 466
            A
Sbjct: 475 GA 476