Pairwise Alignments

Query, 465 a.a., Probable transmembrane protein from Variovorax sp. SCN45

Subject, 451 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 124/464 (26%), Positives = 180/464 (38%), Gaps = 57/464 (12%)

Query: 2   SLVTRCPACTTTFKVVRDQLRISDGWVRCGRCSHVFDATLDLHEAPDGASASASPAMQGG 61
           S VT+CP C T+F+V   QL ++ G VRCG C  VF+A   L E    A+ SA       
Sbjct: 4   SFVTQCPHCQTSFRVTHHQLGVARGVVRCGHCLQVFNAAKQLLEQNRAATTSAP------ 57

Query: 62  YMPGLVES-PPEPKAAPSPAPV-----PPPPAVEAPAQPAAEDADFFDDEPEHHQSRQDP 115
            +P  V + P EP A P+  P       PP    A    A ++ D  D E E  + R  P
Sbjct: 58  VVPAPVPAVPAEPLAEPAQEPATSVRGTPPDQDWALTAQALDELD-LDKELERLERRGQP 116

Query: 116 LPEASGPSLPPAVMPPLPSPLDFSLALPEH-----GIAADEPWSDLDATEPAWKPPQRTL 170
                 P+ P +    L +  D  L   EH     G A DEP+      EPA +P    L
Sbjct: 117 -----APTHPASQDDKLQARRD-ELHPHEHAEDLFGTATDEPYV---PQEPA-EPTPVLL 166

Query: 171 PPFPSIDLNLASAPPSPPPPVPPLPAKSQARMRTLVERASDDGEGE---REQEEKDHDQV 227
            P P ++L+L  AP     P             TL      D +GE       E+D DQ 
Sbjct: 167 EPEP-LELDLEPAPGERTEP-------------TLGSNLDLDIDGEPPVHGAAERD-DQP 211

Query: 228 QMQKALRRARIKSAKIA-SAKAREERAAAKAASSASAVQAVQTESEPDFSLSSTFEPPPG 286
              + LR +  ++ +   SA+  E  A    A     V+ +  E         +  P   
Sbjct: 212 AFSEPLRISDDETPETGLSARDDEPLALRLTAHDDEPVEPLPGERLEPGLAGKSERPSRK 271

Query: 287 HPLSE-EDDPAETLPGFWQRKS----VRVLLVLLAVLAVLLLVVQVIRHERDGIAARQPN 341
            PL +  DDP +     W++ +     R+L   L +LA  LL  Q +    D + ARQ  
Sbjct: 272 EPLVDVVDDPLQL---GWEKPAPNWGKRLLWGFLTLLAAGLLAFQYVWFHFDEM-ARQDQ 327

Query: 342 LRPALAMLCQYTGCELAALRQIGDIVIEGAAFAREKSGSNDYRLSFTLRNGATVPLAMPA 401
            RP    +C   GC++     I  I                  +   + N A      P 
Sbjct: 328 YRPIFQQICPMVGCQVPTRVDIARIKSSNLVVRSHPDFKGALIVDAIIYNRAPFAQPFPL 387

Query: 402 VELSLLDTQERAVVRRVLMPADYGAPAVLAARADRAASLPLTLS 445
           +EL   D   + +  R   P++Y     LA R +  +  P+ ++
Sbjct: 388 LELRFADLNGQLIASRRFKPSEY-LSGELAGRGEMPSQTPIHIA 430