Pairwise Alignments

Query, 516 a.a., Two-component system response regulator protein from Variovorax sp. SCN45

Subject, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

 Score =  281 bits (719), Expect = 4e-80
 Identities = 178/499 (35%), Positives = 269/499 (53%), Gaps = 40/499 (8%)

Query: 15  ILVIDDEPDLRTLYELTLLREGYRVEAAGSVSEAWQHLEAGRFDAVITDMRLPDGQGMEI 74
           ILV++D+  L       L  +GY V    S   A + ++  + DAV+TD  LP   G ++
Sbjct: 5   ILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMSGHDL 64

Query: 75  IHRIQKDQRSERCVVMTAYGSAENAVEALKAGAFDYLTKPVDLKQFRAVVASAVQARNAA 134
           +  +       + ++MT YG+ E+AV+A+K GAF YLTKPV L + +  +  A+    A 
Sbjct: 65  LRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKAL----AT 120

Query: 135 QQPAKSVPVVAAGNNDAPLVTSDSGVAALDRLVGDSEPMRLVKSRIAKVA---RGMA--- 188
           ++  +++               ++  + L  L+G+S  M  +K  + +V    R MA   
Sbjct: 121 ERMERTLSFYQE---------REAQKSGLQALIGESPVMLTLKHTLRQVLDAERRMASDD 171

Query: 189 --PVLVRGESGTGKELVARAVHACSQRSDGPFVAVNCGAIPENLLEAEFFGARKGSYTGS 246
             PVL+ GE+GTGKELVARA+H    RS GPF+  NC +IP NLLEAE FG  KG++T +
Sbjct: 172 LPPVLIEGETGTGKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDA 231

Query: 247 AQDRDGYFQAARGGTLFLDEIGDLPLAMQSKLLRAIQERSVRSIGSTQEDTVDVRIVSAT 306
            + R G  +AA GGTLFLDEIG++ L +Q+KLL+ +++RS+R IG+ +E  VD+R++SAT
Sbjct: 232 KERRVGLVEAADGGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISAT 291

Query: 307 HKDLHSEVQAGRFRQDLFYRLNVIEIAVPALRDRREDLPALCAALLSRIAHDAGMPVPHL 366
           + +L   VQ G+FR+DLF+RL +I + VP L  R +D+  L    L+  +   G P    
Sbjct: 292 NCNLEQMVQQGKFRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRF 351

Query: 367 SDDLLRRLGMHPLDGNVRELENLLHRAVALNDGDELHLDLMGGFTPSAEAAASAPAPLMP 426
           S +    L  +   GNVREL N+L + V L               P+    A      M 
Sbjct: 352 SAEAESLLLGYSWPGNVRELRNMLEQTVLL--------------APNEVVQAHQLNLCMT 397

Query: 427 EITTPAMLMPAPAPVAPPKPAPPPLPSDLQAYLDQQEREILVRALHDSGFNRTAAAARLG 486
            +  P    P  A    P+  P P  S     L   ER+++ + L  + +N T +A  LG
Sbjct: 398 LVDEPLAQQPMAAMFEMPRHEPEPGTS-----LPDMERDLVCKTLDRTDWNVTKSARMLG 452

Query: 487 MSLRQIRYRIARLGITTPN 505
           +S   +RYRI +LG+T P+
Sbjct: 453 LSRDMLRYRIEKLGLTRPD 471