Pairwise Alignments

Query, 354 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 154 VLIAGATSSGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRSGVVSMTQL 213
           +L+ G T SGKTT   A+++EI    D+++ +ED +E Q      +P+  + G ++  + 
Sbjct: 353 ILVTGPTGSGKTTTLYAMISEINHGVDKIITIEDPVEYQLPGVLQIPVNEKKG-LTFARG 411

Query: 214 VRSSMRLRPDRVVVGEVRGAEALDL-IKVWGTGHPGGIATIHAGSALGALLRMEQL 268
           +RS +R  PD+++VGE+R  +   + ++   TGH     TIHA +    + R  Q+
Sbjct: 412 LRSILRHDPDKILVGEIRDPDTAQIAVQSALTGHL-VFTTIHANNVFDVIGRFSQM 466