Pairwise Alignments

Query, 370 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  104 bits (259), Expect = 4e-27
 Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 9/309 (2%)

Query: 52  GVDTVAWLAISDLKQDDLADASAVVAVEKFGELITRAVSLSRETGFGVLAGRRLLTATHG 111
           G +  A LA S +   DL  A A +  ++  EL   A +++R    G+  G+R+  + +G
Sbjct: 49  GCEASALLAGSGIGPADLGHADARITTQQ--ELQVCANAVARREDIGLELGQRMRVSCYG 106

Query: 112 VLGMAAAASRSIREAMQIVERFVCIRTEAISIHTREVNGSLEVWFEPAIGLGSASNTV-- 169
           +LG A  +S ++ +A+++  ++  +      +  R ++    VWF  +    S + +   
Sbjct: 107 MLGYALLSSATLGDALRLALQYPALLGTVFKL--RLLDDGQRVWFSASDYQDSPALSAFN 164

Query: 170 TEIAMVAVKNIADDIFLSRSACNMVYFQFPEPPHAALARGVYGCAVRYNQKWSGLSFDIS 229
            E  +V++K I DD+           F+ P P + AL  G + C + +  + +  +F+  
Sbjct: 165 AEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAFERR 224

Query: 230 AAEEVTQKYDPLVLTEAVRFCVEELNETGDNRSAG-SKLEKIVLERLPPIPHLTVCARLL 288
             +      DP+        C   LN     R A   ++ +++ ++L   P L   AR +
Sbjct: 225 WLDMPLPLADPITHKAMSERC-RRLNLEFTGRQAWLGRIRQLLAQQLDAAPGLEGLARQM 283

Query: 289 STTPRTLHRRLIEEGTSYREIVESIRHRMALKLLR-KGSSIKEVTYFLGYADIASFRRAF 347
           + + RTL R L   G+SY+++++ +R   A +LL  +   I  +   LG+++ ASFR AF
Sbjct: 284 NCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRHAF 343

Query: 348 RRWEGMAPS 356
           +RW G+APS
Sbjct: 344 QRWSGVAPS 352